Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRGV1A0A0A0MS02 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV1A0A0A0MS02 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV1A0A0A0MS02 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV1A0A0A0MS02 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRGV1A0A0A0MS02 AC006077.2-201ENST00000623591 457 ntBASIC20.65■□□□□ 0.9
TRGV1A0A0A0MS02 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV1A0A0A0MS02 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV1A0A0A0MS02 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV1A0A0A0MS02 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
TRGV1A0A0A0MS02 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV1A0A0A0MS02 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV1A0A0A0MS02 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV1A0A0A0MS02 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRGV1A0A0A0MS02 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV1A0A0A0MS02 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV1A0A0A0MS02 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV1A0A0A0MS02 ZNRF2P1-201ENST00000441407 443 ntBASIC20.52■□□□□ 0.88
TRGV1A0A0A0MS02 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRGV1A0A0A0MS02 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRGV1A0A0A0MS02 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV1A0A0A0MS02 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV1A0A0A0MS02 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.49■□□□□ 0.87
TRGV1A0A0A0MS02 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV1A0A0A0MS02 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV1A0A0A0MS02 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV1A0A0A0MS02 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV1A0A0A0MS02 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.45■□□□□ 0.86
TRGV1A0A0A0MS02 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV1A0A0A0MS02 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV1A0A0A0MS02 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV1A0A0A0MS02 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRGV1A0A0A0MS02 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV1A0A0A0MS02 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV1A0A0A0MS02 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRGV1A0A0A0MS02 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV1A0A0A0MS02 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV1A0A0A0MS02 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV1A0A0A0MS02 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.4■□□□□ 0.86
TRGV1A0A0A0MS02 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TRGV1A0A0A0MS02 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV1A0A0A0MS02 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV1A0A0A0MS02 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV1A0A0A0MS02 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.35■□□□□ 0.85
TRGV1A0A0A0MS02 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRGV1A0A0A0MS02 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV1A0A0A0MS02 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.31■□□□□ 0.84
TRGV1A0A0A0MS02 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.31■□□□□ 0.84
TRGV1A0A0A0MS02 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV1A0A0A0MS02 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.3■□□□□ 0.84
TRGV1A0A0A0MS02 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV1A0A0A0MS02 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV1A0A0A0MS02 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.29■□□□□ 0.84
TRGV1A0A0A0MS02 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV1A0A0A0MS02 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV1A0A0A0MS02 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRGV1A0A0A0MS02 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TRGV1A0A0A0MS02 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV1A0A0A0MS02 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV1A0A0A0MS02 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV1A0A0A0MS02 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV1A0A0A0MS02 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.22■□□□□ 0.83
TRGV1A0A0A0MS02 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRGV1A0A0A0MS02 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV1A0A0A0MS02 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.2■□□□□ 0.82
TRGV1A0A0A0MS02 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.2■□□□□ 0.82
TRGV1A0A0A0MS02 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV1A0A0A0MS02 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRGV1A0A0A0MS02 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV1A0A0A0MS02 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV1A0A0A0MS02 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRGV1A0A0A0MS02 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.15■□□□□ 0.82
TRGV1A0A0A0MS02 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV1A0A0A0MS02 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV1A0A0A0MS02 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV1A0A0A0MS02 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.13■□□□□ 0.81
TRGV1A0A0A0MS02 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV1A0A0A0MS02 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV1A0A0A0MS02 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.12■□□□□ 0.81
TRGV1A0A0A0MS02 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 DYNLL1-208ENST00000550178 581 ntBASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV1A0A0A0MS02 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRGV1A0A0A0MS02 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TRGV1A0A0A0MS02 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV1A0A0A0MS02 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV1A0A0A0MS02 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.09■□□□□ 0.81
TRGV1A0A0A0MS02 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRGV1A0A0A0MS02 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.09■□□□□ 0.81
TRGV1A0A0A0MS02 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRGV1A0A0A0MS02 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV1A0A0A0MS02 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV1A0A0A0MS02 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.07■□□□□ 0.8
TRGV1A0A0A0MS02 AP002365.1-201ENST00000603448 772 ntBASIC20.06■□□□□ 0.8
TRGV1A0A0A0MS02 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms