Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZC3H3Q8IXZ2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.5■■□□□ 1.83
ZC3H3Q8IXZ2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ZC3H3Q8IXZ2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ZC3H3Q8IXZ2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H3Q8IXZ2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H3Q8IXZ2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H3Q8IXZ2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.48■■□□□ 1.83
ZC3H3Q8IXZ2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H3Q8IXZ2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H3Q8IXZ2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H3Q8IXZ2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H3Q8IXZ2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.46■■□□□ 1.83
ZC3H3Q8IXZ2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H3Q8IXZ2 ECEL1P2-201ENST00000461596 1295 ntBASIC26.46■■□□□ 1.83
ZC3H3Q8IXZ2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
ZC3H3Q8IXZ2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.45■■□□□ 1.83
ZC3H3Q8IXZ2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
ZC3H3Q8IXZ2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
ZC3H3Q8IXZ2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.45■■□□□ 1.82
ZC3H3Q8IXZ2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3H3Q8IXZ2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H3Q8IXZ2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H3Q8IXZ2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H3Q8IXZ2 SMPD5-203ENST00000639008 1464 ntBASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 AC022413.1-201ENST00000624602 984 ntBASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H3Q8IXZ2 MIR3960-201ENST00000583311 91 ntBASIC26.42■■□□□ 1.82
ZC3H3Q8IXZ2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
ZC3H3Q8IXZ2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.41■■□□□ 1.82
ZC3H3Q8IXZ2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
ZC3H3Q8IXZ2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZC3H3Q8IXZ2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H3Q8IXZ2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H3Q8IXZ2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H3Q8IXZ2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.4■■□□□ 1.82
ZC3H3Q8IXZ2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H3Q8IXZ2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
ZC3H3Q8IXZ2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ZC3H3Q8IXZ2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
ZC3H3Q8IXZ2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
ZC3H3Q8IXZ2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
ZC3H3Q8IXZ2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ZC3H3Q8IXZ2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.37■■□□□ 1.81
ZC3H3Q8IXZ2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H3Q8IXZ2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H3Q8IXZ2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
ZC3H3Q8IXZ2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.35■■□□□ 1.81
ZC3H3Q8IXZ2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3H3Q8IXZ2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3H3Q8IXZ2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.34■■□□□ 1.81
ZC3H3Q8IXZ2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.33■■□□□ 1.81
ZC3H3Q8IXZ2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
ZC3H3Q8IXZ2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ZC3H3Q8IXZ2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 GPX1-201ENST00000419349 1106 ntBASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 RP9P-202ENST00000450133 1212 ntBASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.31■■□□□ 1.8
ZC3H3Q8IXZ2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms