RNA–Protein interactions for RNA: ENST00000606380.2

IFNL4-201, Transcript of interferon lambda 4 (gene/pseudogene), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene IFNL4, Length 1,637 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNL4-201ENST00000606380 NISCHQ9Y2I1 1504 aa55.36■■■■■ 6.45
IFNL4-201ENST00000606380 CCDC180Q9P1Z9 1646 aa48.5■■■■■ 5.35
IFNL4-201ENST00000606380 ZCCHC6Q5VYS8 1495 aaKnown RBP46.42■■■■■ 5.02
IFNL4-201ENST00000606380 ABCC9O60706 1549 aa45.99■■■■■ 4.95
IFNL4-201ENST00000606380 DCAF1Q9Y4B6 1507 aa45.95■■■■■ 4.95
IFNL4-201ENST00000606380 MYO15BQ96JP2 1530 aa45.62■■■■■ 4.89
IFNL4-201ENST00000606380 DCAF8L2P0C7V8 631 aa45.55■■■■■ 4.88
IFNL4-201ENST00000606380 NACADO15069 1562 aa45.3■■■■■ 4.84
IFNL4-201ENST00000606380 RB1CC1Q8TDY2 1594 aa44.93■■■■■ 4.78
IFNL4-201ENST00000606380 SHROOM4Q9ULL8 1493 aa44.5■■■■■ 4.71
IFNL4-201ENST00000606380 SCRIBQ14160 1630 aa44.28■■■■■ 4.68
IFNL4-201ENST00000606380 UNC13AQ9UPW8 1703 aa43.85■■■■■ 4.61
IFNL4-201ENST00000606380 BICRAQ9NZM4 1560 aa43.53■■■■■ 4.56
IFNL4-201ENST00000606380 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
IFNL4-201ENST00000606380 CECR2Q9BXF3 1484 aa42.92■■■■■ 4.46
IFNL4-201ENST00000606380 BAZ1AQ9NRL2 1556 aaPredicted RBP42.79■■■■■ 4.44
IFNL4-201ENST00000606380 RSF1Q96T23 1441 aaPredicted RBP42.77■■■■■ 4.44
IFNL4-201ENST00000606380 SUPT5HO00267 1087 aaKnown RBP42.71■■■■■ 4.43
IFNL4-201ENST00000606380 MROH2BQ7Z745 1585 aa42.65■■■■■ 4.42
IFNL4-201ENST00000606380 SMARCA4P51532 1647 aa42.58■■■■■ 4.41
IFNL4-201ENST00000606380 EIF4G1Q04637 1599 aaKnown RBP42.25■■■■■ 4.35
IFNL4-201ENST00000606380 PEG3Q9GZU2 1588 aa42.24■■■■■ 4.35
IFNL4-201ENST00000606380 WIZO95785 1651 aa42.21■■■■■ 4.35
IFNL4-201ENST00000606380 SMARCA2P51531 1590 aa42.04■■■■■ 4.32
IFNL4-201ENST00000606380 ATAD2BQ9ULI0 1458 aa42.03■■■■■ 4.32
IFNL4-201ENST00000606380 TOP2AP11388 1531 aaKnown RBP41.9■■■■■ 4.3
IFNL4-201ENST00000606380 NCAPD3P42695 1498 aa41.84■■■■■ 4.29
IFNL4-201ENST00000606380 BAZ1BQ9UIG0 1483 aaKnown RBP41.71■■■■■ 4.27
IFNL4-201ENST00000606380 HMGXB3Q12766 1538 aa41.7■■■■■ 4.27
IFNL4-201ENST00000606380 CC2D2AQ9P2K1 1620 aa41.68■■■■■ 4.26
IFNL4-201ENST00000606380 CCDC88BA6NC98 1476 aa41.43■■■■■ 4.22
IFNL4-201ENST00000606380 DNAJC5BQ9UF47 199 aa41.43■■■■■ 4.22
IFNL4-201ENST00000606380 CHIC1Q5VXU3 224 aa40.85■■■■■ 4.13
IFNL4-201ENST00000606380 CFTRP13569 1480 aa40.75■■■■■ 4.11
IFNL4-201ENST00000606380 CADPSQ9ULU8 1353 aa40.68■■■■■ 4.1
IFNL4-201ENST00000606380 LAMC3Q9Y6N6 1575 aa40.42■■■■■ 4.06
IFNL4-201ENST00000606380 PRDM2Q13029 1718 aa40.41■■■■■ 4.06
IFNL4-201ENST00000606380 TRIM41Q8WV44 630 aa40.34■■■■■ 4.05
IFNL4-201ENST00000606380 ABCC8Q09428 1581 aa40.28■■■■■ 4.04
IFNL4-201ENST00000606380 WRNQ14191 1432 aaPredicted RBP eCLIP40.25■■■■■ 4.03
IFNL4-201ENST00000606380 NESP48681 1621 aa40.24■■■■■ 4.03
IFNL4-201ENST00000606380 FANCD2Q9BXW9 1451 aa40.14■■■■■ 4.02
IFNL4-201ENST00000606380 PDS5BQ9NTI5 1447 aa40.13■■■■■ 4.02
IFNL4-201ENST00000606380 SYNJ1O43426 1573 aa40■■■■□ 3.99
IFNL4-201ENST00000606380 TOP2BQ02880 1626 aa39.98■■■■□ 3.99
IFNL4-201ENST00000606380 BIVM-ERCC5R4GMW8 1640 aa39.94■■■■□ 3.98
IFNL4-201ENST00000606380 CEP164Q9UPV0 1460 aa39.93■■■■□ 3.98
IFNL4-201ENST00000606380 CUX1P39880 1505 aa39.91■■■■□ 3.98
IFNL4-201ENST00000606380 KIF21AQ7Z4S6 1674 aa39.75■■■■□ 3.95
IFNL4-201ENST00000606380 DNMBPQ6XZF7 1577 aa39.74■■■■□ 3.95
IFNL4-201ENST00000606380 TOPBP1Q92547 1522 aa39.67■■■■□ 3.94
IFNL4-201ENST00000606380 URB2Q14146 1524 aaKnown RBP39.63■■■■□ 3.94
IFNL4-201ENST00000606380 EEA1Q15075 1411 aa39.6■■■■□ 3.93
IFNL4-201ENST00000606380 MRC2Q9UBG0 1479 aa39.57■■■■□ 3.92
IFNL4-201ENST00000606380 FGD5Q6ZNL6 1462 aa39.53■■■■□ 3.92
IFNL4-201ENST00000606380 ERCC6Q03468 1493 aa39.52■■■■□ 3.92
IFNL4-201ENST00000606380 SOGA1O94964 1423 aa39.52■■■■□ 3.92
IFNL4-201ENST00000606380 POLA1P09884 1462 aaPredicted RBP39.44■■■■□ 3.9
IFNL4-201ENST00000606380 WDR62O43379 1518 aa39.41■■■■□ 3.9
IFNL4-201ENST00000606380 FAM9AQ8IZU1 332 aaPredicted RBP39.36■■■■□ 3.89
IFNL4-201ENST00000606380 RUSC2Q8N2Y8 1516 aa39.35■■■■□ 3.89
IFNL4-201ENST00000606380 CSRNP3Q8WYN3 585 aa39.32■■■■□ 3.88
IFNL4-201ENST00000606380 KIF27Q86VH2 1401 aa39.31■■■■□ 3.88
IFNL4-201ENST00000606380 THOC2Q8NI27 1593 aaKnown RBP39.3■■■■□ 3.88
IFNL4-201ENST00000606380 ABCA10Q8WWZ4 1543 aa39.29■■■■□ 3.88
IFNL4-201ENST00000606380 RAD54L2Q9Y4B4 1467 aa39.22■■■■□ 3.87
IFNL4-201ENST00000606380 CUX2O14529 1486 aa39.19■■■■□ 3.86
IFNL4-201ENST00000606380 LOC105371045A0A1W2PR82 267 aa39.12■■■■□ 3.85
IFNL4-201ENST00000606380 TARBP1Q13395 1621 aaKnown RBP39.12■■■■□ 3.85
IFNL4-201ENST00000606380 WDR97A6NE52 1622 aa39.1■■■■□ 3.85
IFNL4-201ENST00000606380 IFT140Q96RY7 1462 aa39.08■■■■□ 3.85
IFNL4-201ENST00000606380 IGF1RP08069 1367 aa39.01■■■■□ 3.84
IFNL4-201ENST00000606380 KIF21BO75037 1637 aa38.99■■■■□ 3.83
IFNL4-201ENST00000606380 PRXQ9BXM0 1461 aa38.97■■■■□ 3.83
IFNL4-201ENST00000606380 ABCA5Q8WWZ7 1642 aa38.93■■■■□ 3.82
IFNL4-201ENST00000606380 GOLGA3Q08378 1498 aa38.9■■■■□ 3.82
IFNL4-201ENST00000606380 TDRD9Q8NDG6 1382 aaKnown RBP38.9■■■■□ 3.82
IFNL4-201ENST00000606380 GAPVD1Q14C86 1478 aa38.88■■■■□ 3.82
IFNL4-201ENST00000606380 ERICH3Q5RHP9 1530 aa38.86■■■■□ 3.81
IFNL4-201ENST00000606380 CARMIL1Q5VZK9 1371 aa38.78■■■■□ 3.8
IFNL4-201ENST00000606380 TNIKQ9UKE5 1360 aa38.76■■■■□ 3.8
IFNL4-201ENST00000606380 RAPGEF2Q9Y4G8 1499 aa38.75■■■■□ 3.79
IFNL4-201ENST00000606380 CUL7Q14999 1698 aa38.72■■■■□ 3.79
IFNL4-201ENST00000606380 ZNF608Q9ULD9 1512 aaPredicted RBP38.72■■■■□ 3.79
IFNL4-201ENST00000606380 AQRO60306 1485 aaKnown RBP eCLIP38.71■■■■□ 3.79
IFNL4-201ENST00000606380 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
IFNL4-201ENST00000606380 UBTFP17480 764 aaKnown RBP38.64■■■■□ 3.78
IFNL4-201ENST00000606380 EHMT2Q96KQ7 1210 aa38.63■■■■□ 3.78
IFNL4-201ENST00000606380 EIF4G3O43432 1585 aaKnown RBP38.59■■■■□ 3.77
IFNL4-201ENST00000606380 PBRM1Q86U86 1689 aa38.59■■■■□ 3.77
IFNL4-201ENST00000606380 FHAD1B1AJZ9 1412 aa38.51■■■■□ 3.76
IFNL4-201ENST00000606380 MAGI1Q96QZ7 1491 aaPredicted RBP38.43■■■■□ 3.74
IFNL4-201ENST00000606380 ADAMTS12P58397 1594 aa38.42■■■■□ 3.74
IFNL4-201ENST00000606380 CEP162Q5TB80 1403 aa38.4■■■■□ 3.74
IFNL4-201ENST00000606380 SNAPC4Q5SXM2 1469 aa38.36■■■■□ 3.73
IFNL4-201ENST00000606380 SYNJ2O15056 1496 aa38.26■■■■□ 3.72
IFNL4-201ENST00000606380 CLIP1P30622 1438 aa38.22■■■■□ 3.71
IFNL4-201ENST00000606380 GRIN2AQ12879 1464 aa38.17■■■■□ 3.7
IFNL4-201ENST00000606380 CTTNBP2Q8WZ74 1663 aa38.13■■■■□ 3.7
IFNL4-201ENST00000606380 CHMP7Q8WUX9 453 aaPredicted RBP38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms