RNA–Protein interactions for RNA: ENST00000303077.6

SIX2-201, Transcript of SIX homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX2, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2-201ENST00000303077 NISCHQ9Y2I1 1504 aa52.04■■■■■ 5.92
SIX2-201ENST00000303077 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
SIX2-201ENST00000303077 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
SIX2-201ENST00000303077 SHROOM4Q9ULL8 1493 aa43.45■■■■■ 4.55
SIX2-201ENST00000303077 DCAF8L2P0C7V8 631 aa43.02■■■■■ 4.48
SIX2-201ENST00000303077 DCAF1Q9Y4B6 1507 aa42.84■■■■■ 4.45
SIX2-201ENST00000303077 SUPT5HO00267 1087 aaKnown RBP42.19■■■■■ 4.34
SIX2-201ENST00000303077 MYO15BQ96JP2 1530 aa41.95■■■■■ 4.31
SIX2-201ENST00000303077 ABCC9O60706 1549 aa41.93■■■■■ 4.3
SIX2-201ENST00000303077 SCRIBQ14160 1630 aa41.63■■■■■ 4.25
SIX2-201ENST00000303077 NACADO15069 1562 aa41.55■■■■■ 4.24
SIX2-201ENST00000303077 RB1CC1Q8TDY2 1594 aa41.02■■■■■ 4.16
SIX2-201ENST00000303077 RSF1Q96T23 1441 aaPredicted RBP40.8■■■■■ 4.12
SIX2-201ENST00000303077 CHIC1Q5VXU3 224 aa40.74■■■■■ 4.11
SIX2-201ENST00000303077 CECR2Q9BXF3 1484 aa40.56■■■■■ 4.08
SIX2-201ENST00000303077 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
SIX2-201ENST00000303077 MROH2BQ7Z745 1585 aa40.37■■■■■ 4.05
SIX2-201ENST00000303077 WIZO95785 1651 aa40.11■■■■■ 4.01
SIX2-201ENST00000303077 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
SIX2-201ENST00000303077 BICRAQ9NZM4 1560 aa39.93■■■■□ 3.98
SIX2-201ENST00000303077 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
SIX2-201ENST00000303077 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
SIX2-201ENST00000303077 TOP2AP11388 1531 aaKnown RBP39.54■■■■□ 3.92
SIX2-201ENST00000303077 TRIM41Q8WV44 630 aa39.45■■■■□ 3.91
SIX2-201ENST00000303077 LOC105371045A0A1W2PR82 267 aa39.39■■■■□ 3.9
SIX2-201ENST00000303077 EIF4G1Q04637 1599 aaKnown RBP39.31■■■■□ 3.88
SIX2-201ENST00000303077 SMARCA2P51531 1590 aa39.28■■■■□ 3.88
SIX2-201ENST00000303077 CCDC88BA6NC98 1476 aa39.28■■■■□ 3.88
SIX2-201ENST00000303077 PEG3Q9GZU2 1588 aa39.19■■■■□ 3.86
SIX2-201ENST00000303077 ATAD2BQ9ULI0 1458 aa38.97■■■■□ 3.83
SIX2-201ENST00000303077 FAM9AQ8IZU1 332 aaPredicted RBP38.97■■■■□ 3.83
SIX2-201ENST00000303077 ABCC8Q09428 1581 aa38.85■■■■□ 3.81
SIX2-201ENST00000303077 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
SIX2-201ENST00000303077 EHMT2Q96KQ7 1210 aa38.56■■■■□ 3.76
SIX2-201ENST00000303077 PCGF6Q9BYE7 350 aa38.47■■■■□ 3.75
SIX2-201ENST00000303077 NCAPD3P42695 1498 aa38.4■■■■□ 3.74
SIX2-201ENST00000303077 HMGXB3Q12766 1538 aa38.39■■■■□ 3.74
SIX2-201ENST00000303077 WRNQ14191 1432 aaPredicted RBP eCLIP38.34■■■■□ 3.73
SIX2-201ENST00000303077 SOGA1O94964 1423 aa38.29■■■■□ 3.72
SIX2-201ENST00000303077 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
SIX2-201ENST00000303077 RUSC2Q8N2Y8 1516 aa38.15■■■■□ 3.7
SIX2-201ENST00000303077 EEA1Q15075 1411 aa38.08■■■■□ 3.69
SIX2-201ENST00000303077 TRIM26Q12899 539 aaPredicted RBP38.06■■■■□ 3.68
SIX2-201ENST00000303077 CSRNP3Q8WYN3 585 aa37.99■■■■□ 3.67
SIX2-201ENST00000303077 HRCP23327 699 aa37.97■■■■□ 3.67
SIX2-201ENST00000303077 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
SIX2-201ENST00000303077 CC2D2AQ9P2K1 1620 aa37.86■■■■□ 3.65
SIX2-201ENST00000303077 CFTRP13569 1480 aa37.84■■■■□ 3.65
SIX2-201ENST00000303077 BIVM-ERCC5R4GMW8 1640 aa37.79■■■■□ 3.64
SIX2-201ENST00000303077 TNIKQ9UKE5 1360 aa37.78■■■■□ 3.64
SIX2-201ENST00000303077 CEP162Q5TB80 1403 aa37.74■■■■□ 3.63
SIX2-201ENST00000303077 GOLGA3Q08378 1498 aa37.73■■■■□ 3.63
SIX2-201ENST00000303077 UBTFP17480 764 aaKnown RBP37.67■■■■□ 3.62
SIX2-201ENST00000303077 CUX1P39880 1505 aa37.66■■■■□ 3.62
SIX2-201ENST00000303077 KIF21BO75037 1637 aa37.63■■■■□ 3.61
SIX2-201ENST00000303077 CEP164Q9UPV0 1460 aa37.62■■■■□ 3.61
SIX2-201ENST00000303077 PRDM2Q13029 1718 aa37.61■■■■□ 3.61
SIX2-201ENST00000303077 PPARGC1BQ86YN6 1023 aaKnown RBP37.57■■■■□ 3.61
SIX2-201ENST00000303077 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
SIX2-201ENST00000303077 RAPGEF2Q9Y4G8 1499 aa37.43■■■■□ 3.58
SIX2-201ENST00000303077 PRXQ9BXM0 1461 aa37.24■■■■□ 3.55
SIX2-201ENST00000303077 KIF27Q86VH2 1401 aa37.23■■■■□ 3.55
SIX2-201ENST00000303077 CLIP1P30622 1438 aa37.22■■■■□ 3.55
SIX2-201ENST00000303077 ERICH3Q5RHP9 1530 aa37.18■■■■□ 3.54
SIX2-201ENST00000303077 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
SIX2-201ENST00000303077 NESP48681 1621 aa37.13■■■■□ 3.53
SIX2-201ENST00000303077 TTBK1Q5TCY1 1321 aaPredicted RBP37.11■■■■□ 3.53
SIX2-201ENST00000303077 FGD5Q6ZNL6 1462 aa37.1■■■■□ 3.53
SIX2-201ENST00000303077 CUX2O14529 1486 aa37.04■■■■□ 3.52
SIX2-201ENST00000303077 RANGAP1P46060 587 aaPredicted RBP37.02■■■■□ 3.52
SIX2-201ENST00000303077 VPS8Q8N3P4 1428 aa36.98■■■■□ 3.51
SIX2-201ENST00000303077 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
SIX2-201ENST00000303077 DNMBPQ6XZF7 1577 aa36.93■■■■□ 3.5
SIX2-201ENST00000303077 LAMC3Q9Y6N6 1575 aa36.93■■■■□ 3.5
SIX2-201ENST00000303077 IGF1RP08069 1367 aa36.9■■■■□ 3.5
SIX2-201ENST00000303077 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
SIX2-201ENST00000303077 ZEB1P37275 1124 aaPredicted RBP36.84■■■■□ 3.49
SIX2-201ENST00000303077 POLA1P09884 1462 aaPredicted RBP36.78■■■■□ 3.48
SIX2-201ENST00000303077 ARAP1Q96P48 1450 aa36.78■■■■□ 3.48
SIX2-201ENST00000303077 RAD54L2Q9Y4B4 1467 aa36.77■■■■□ 3.48
SIX2-201ENST00000303077 CARMIL1Q5VZK9 1371 aa36.72■■■■□ 3.47
SIX2-201ENST00000303077 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
SIX2-201ENST00000303077 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
SIX2-201ENST00000303077 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
SIX2-201ENST00000303077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.63■■■■□ 3.46
SIX2-201ENST00000303077 APLP2Q06481 763 aa36.63■■■■□ 3.46
SIX2-201ENST00000303077 ARHGAP35Q9NRY4 1499 aa36.6■■■■□ 3.45
SIX2-201ENST00000303077 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
SIX2-201ENST00000303077 WDR97A6NE52 1622 aa36.51■■■■□ 3.43
SIX2-201ENST00000303077 CCER1Q8TC90 406 aaPredicted RBP36.48■■■■□ 3.43
SIX2-201ENST00000303077 CUL7Q14999 1698 aa36.39■■■■□ 3.42
SIX2-201ENST00000303077 KANK4Q5T7N3 995 aaPredicted RBP36.35■■■■□ 3.41
SIX2-201ENST00000303077 ABCA5Q8WWZ7 1642 aa36.35■■■■□ 3.41
SIX2-201ENST00000303077 TDRD9Q8NDG6 1382 aaKnown RBP36.34■■■■□ 3.41
SIX2-201ENST00000303077 HNRNPUL2Q1KMD3 747 aaKnown RBP36.28■■■■□ 3.4
SIX2-201ENST00000303077 GAPVD1Q14C86 1478 aa36.25■■■■□ 3.39
SIX2-201ENST00000303077 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
SIX2-201ENST00000303077 CTTNBP2Q8WZ74 1663 aa36.18■■■■□ 3.38
SIX2-201ENST00000303077 MRC2Q9UBG0 1479 aa36.15■■■■□ 3.38
SIX2-201ENST00000303077 P3H3Q8IVL6 736 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms