RNA–Protein interactions for RNA: ENST00000563972.1

SPIRE2-205, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 1 (best) BASIC

Gene SPIRE2, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-205ENST00000563972 NISCHQ9Y2I1 1504 aa52.55■■■■■ 6
SPIRE2-205ENST00000563972 CCDC180Q9P1Z9 1646 aa46.46■■■■■ 5.03
SPIRE2-205ENST00000563972 ABCC9O60706 1549 aa45.54■■■■■ 4.88
SPIRE2-205ENST00000563972 DCAF8L2P0C7V8 631 aa44.11■■■■■ 4.65
SPIRE2-205ENST00000563972 ZCCHC6Q5VYS8 1495 aaKnown RBP43.78■■■■■ 4.6
SPIRE2-205ENST00000563972 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
SPIRE2-205ENST00000563972 NACADO15069 1562 aa43.71■■■■■ 4.59
SPIRE2-205ENST00000563972 MYO15BQ96JP2 1530 aa43.45■■■■■ 4.55
SPIRE2-205ENST00000563972 DCAF1Q9Y4B6 1507 aa43.36■■■■■ 4.53
SPIRE2-205ENST00000563972 UNC13AQ9UPW8 1703 aa42.72■■■■■ 4.43
SPIRE2-205ENST00000563972 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
SPIRE2-205ENST00000563972 SCRIBQ14160 1630 aa42.6■■■■■ 4.41
SPIRE2-205ENST00000563972 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
SPIRE2-205ENST00000563972 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.38
SPIRE2-205ENST00000563972 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
SPIRE2-205ENST00000563972 SUPT5HO00267 1087 aaKnown RBP41.48■■■■■ 4.23
SPIRE2-205ENST00000563972 EIF4G1Q04637 1599 aaKnown RBP41.3■■■■■ 4.2
SPIRE2-205ENST00000563972 CC2D2AQ9P2K1 1620 aa41.1■■■■■ 4.17
SPIRE2-205ENST00000563972 CECR2Q9BXF3 1484 aa41.02■■■■■ 4.16
SPIRE2-205ENST00000563972 SMARCA4P51532 1647 aa40.69■■■■■ 4.1
SPIRE2-205ENST00000563972 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
SPIRE2-205ENST00000563972 MROH2BQ7Z745 1585 aa40.56■■■■■ 4.08
SPIRE2-205ENST00000563972 ATAD2BQ9ULI0 1458 aa40.48■■■■■ 4.07
SPIRE2-205ENST00000563972 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
SPIRE2-205ENST00000563972 SMARCA2P51531 1590 aa40.36■■■■■ 4.05
SPIRE2-205ENST00000563972 CHIC1Q5VXU3 224 aa40.33■■■■■ 4.05
SPIRE2-205ENST00000563972 PEG3Q9GZU2 1588 aa40.23■■■■■ 4.03
SPIRE2-205ENST00000563972 RSF1Q96T23 1441 aaPredicted RBP40.19■■■■■ 4.02
SPIRE2-205ENST00000563972 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
SPIRE2-205ENST00000563972 HMGXB3Q12766 1538 aa40.13■■■■■ 4.02
SPIRE2-205ENST00000563972 WIZO95785 1651 aa40.12■■■■■ 4.01
SPIRE2-205ENST00000563972 TOP2AP11388 1531 aaKnown RBP39.63■■■■□ 3.93
SPIRE2-205ENST00000563972 NESP48681 1621 aa39.47■■■■□ 3.91
SPIRE2-205ENST00000563972 CADPSQ9ULU8 1353 aa39.28■■■■□ 3.88
SPIRE2-205ENST00000563972 CCDC88BA6NC98 1476 aa39.27■■■■□ 3.88
SPIRE2-205ENST00000563972 LAMC3Q9Y6N6 1575 aa39.23■■■■□ 3.87
SPIRE2-205ENST00000563972 ERCC6Q03468 1493 aa39.19■■■■□ 3.86
SPIRE2-205ENST00000563972 CFTRP13569 1480 aa39.05■■■■□ 3.84
SPIRE2-205ENST00000563972 PDS5BQ9NTI5 1447 aa39.04■■■■□ 3.84
SPIRE2-205ENST00000563972 TRIM41Q8WV44 630 aa38.91■■■■□ 3.82
SPIRE2-205ENST00000563972 KIF21AQ7Z4S6 1674 aa38.88■■■■□ 3.81
SPIRE2-205ENST00000563972 LOC105371045A0A1W2PR82 267 aa38.83■■■■□ 3.81
SPIRE2-205ENST00000563972 FANCD2Q9BXW9 1451 aa38.82■■■■□ 3.8
SPIRE2-205ENST00000563972 CEP164Q9UPV0 1460 aa38.72■■■■□ 3.79
SPIRE2-205ENST00000563972 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
SPIRE2-205ENST00000563972 MRC2Q9UBG0 1479 aa38.61■■■■□ 3.77
SPIRE2-205ENST00000563972 PRDM2Q13029 1718 aa38.59■■■■□ 3.77
SPIRE2-205ENST00000563972 CUX2O14529 1486 aa38.58■■■■□ 3.77
SPIRE2-205ENST00000563972 WDR62O43379 1518 aa38.43■■■■□ 3.74
SPIRE2-205ENST00000563972 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
SPIRE2-205ENST00000563972 PCGF6Q9BYE7 350 aa38.28■■■■□ 3.72
SPIRE2-205ENST00000563972 FAM9AQ8IZU1 332 aaPredicted RBP38.24■■■■□ 3.71
SPIRE2-205ENST00000563972 TOPBP1Q92547 1522 aa38.21■■■■□ 3.71
SPIRE2-205ENST00000563972 HRCP23327 699 aa38.16■■■■□ 3.7
SPIRE2-205ENST00000563972 ABCC8Q09428 1581 aa38.14■■■■□ 3.7
SPIRE2-205ENST00000563972 DNMBPQ6XZF7 1577 aa38.12■■■■□ 3.69
SPIRE2-205ENST00000563972 CUX1P39880 1505 aa38.01■■■■□ 3.68
SPIRE2-205ENST00000563972 TRIM26Q12899 539 aaPredicted RBP38.01■■■■□ 3.68
SPIRE2-205ENST00000563972 POLA1P09884 1462 aaPredicted RBP37.91■■■■□ 3.66
SPIRE2-205ENST00000563972 IFT140Q96RY7 1462 aa37.88■■■■□ 3.65
SPIRE2-205ENST00000563972 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
SPIRE2-205ENST00000563972 FGD5Q6ZNL6 1462 aa37.86■■■■□ 3.65
SPIRE2-205ENST00000563972 RAD54L2Q9Y4B4 1467 aa37.82■■■■□ 3.65
SPIRE2-205ENST00000563972 SOGA1O94964 1423 aa37.81■■■■□ 3.64
SPIRE2-205ENST00000563972 ZNF608Q9ULD9 1512 aaPredicted RBP37.8■■■■□ 3.64
SPIRE2-205ENST00000563972 EEA1Q15075 1411 aa37.77■■■■□ 3.64
SPIRE2-205ENST00000563972 SYNJ1O43426 1573 aa37.73■■■■□ 3.63
SPIRE2-205ENST00000563972 TARBP1Q13395 1621 aaKnown RBP37.73■■■■□ 3.63
SPIRE2-205ENST00000563972 TOP2BQ02880 1626 aa37.67■■■■□ 3.62
SPIRE2-205ENST00000563972 EHMT2Q96KQ7 1210 aa37.65■■■■□ 3.62
SPIRE2-205ENST00000563972 AQRO60306 1485 aaKnown RBP eCLIP37.64■■■■□ 3.62
SPIRE2-205ENST00000563972 TDRD9Q8NDG6 1382 aaKnown RBP37.63■■■■□ 3.61
SPIRE2-205ENST00000563972 BIVM-ERCC5R4GMW8 1640 aa37.63■■■■□ 3.61
SPIRE2-205ENST00000563972 EIF4G3O43432 1585 aaKnown RBP37.54■■■■□ 3.6
SPIRE2-205ENST00000563972 CSRNP3Q8WYN3 585 aa37.47■■■■□ 3.59
SPIRE2-205ENST00000563972 ABCA10Q8WWZ4 1543 aa37.45■■■■□ 3.59
SPIRE2-205ENST00000563972 TNIKQ9UKE5 1360 aa37.42■■■■□ 3.58
SPIRE2-205ENST00000563972 WDR97A6NE52 1622 aa37.4■■■■□ 3.58
SPIRE2-205ENST00000563972 RUSC2Q8N2Y8 1516 aa37.39■■■■□ 3.58
SPIRE2-205ENST00000563972 GAPVD1Q14C86 1478 aa37.33■■■■□ 3.57
SPIRE2-205ENST00000563972 DNAJC5Q9H3Z4 198 aa37.31■■■■□ 3.56
SPIRE2-205ENST00000563972 GOLGA3Q08378 1498 aa37.3■■■■□ 3.56
SPIRE2-205ENST00000563972 CEP162Q5TB80 1403 aa37.29■■■■□ 3.56
SPIRE2-205ENST00000563972 GRIN2BQ13224 1484 aa37.27■■■■□ 3.56
SPIRE2-205ENST00000563972 FBLN2P98095 1184 aa37.24■■■■□ 3.55
SPIRE2-205ENST00000563972 ABCA5Q8WWZ7 1642 aa37.24■■■■□ 3.55
SPIRE2-205ENST00000563972 SNAPC4Q5SXM2 1469 aa37.22■■■■□ 3.55
SPIRE2-205ENST00000563972 KIF21BO75037 1637 aa37.19■■■■□ 3.54
SPIRE2-205ENST00000563972 OSCARQ8IYS5 282 aa37.19■■■■□ 3.54
SPIRE2-205ENST00000563972 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
SPIRE2-205ENST00000563972 ZEB1P37275 1124 aaPredicted RBP37.13■■■■□ 3.53
SPIRE2-205ENST00000563972 MAGI1Q96QZ7 1491 aaPredicted RBP37.1■■■■□ 3.53
SPIRE2-205ENST00000563972 CHMP7Q8WUX9 453 aaPredicted RBP37.1■■■■□ 3.53
SPIRE2-205ENST00000563972 UBTFP17480 764 aaKnown RBP37.08■■■■□ 3.53
SPIRE2-205ENST00000563972 PPARGC1BQ86YN6 1023 aaKnown RBP37.06■■■■□ 3.52
SPIRE2-205ENST00000563972 KIF27Q86VH2 1401 aa37.04■■■■□ 3.52
SPIRE2-205ENST00000563972 CHD1O14646 1710 aa37.02■■■■□ 3.52
SPIRE2-205ENST00000563972 SYNJ2O15056 1496 aa37■■■■□ 3.51
SPIRE2-205ENST00000563972 ERICH3Q5RHP9 1530 aa36.97■■■■□ 3.51
SPIRE2-205ENST00000563972 IGF1RP08069 1367 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms