RNA–Protein interactions for RNA: ENST00000319340.6

CHST13-201, Transcript of carbohydrate sulfotransferase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST13, Length 1,789 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST13-201ENST00000319340 NISCHQ9Y2I1 1504 aa54.47■■■■■ 6.31
CHST13-201ENST00000319340 CCDC180Q9P1Z9 1646 aa47.56■■■■■ 5.2
CHST13-201ENST00000319340 ZCCHC6Q5VYS8 1495 aaKnown RBP45.72■■■■■ 4.91
CHST13-201ENST00000319340 ABCC9O60706 1549 aa45.13■■■■■ 4.81
CHST13-201ENST00000319340 DCAF1Q9Y4B6 1507 aa45.08■■■■■ 4.81
CHST13-201ENST00000319340 DCAF8L2P0C7V8 631 aa45.07■■■■■ 4.8
CHST13-201ENST00000319340 MYO15BQ96JP2 1530 aa44.63■■■■■ 4.74
CHST13-201ENST00000319340 NACADO15069 1562 aa44.39■■■■■ 4.7
CHST13-201ENST00000319340 SHROOM4Q9ULL8 1493 aa44.26■■■■■ 4.68
CHST13-201ENST00000319340 RB1CC1Q8TDY2 1594 aa44.04■■■■■ 4.64
CHST13-201ENST00000319340 SCRIBQ14160 1630 aa43.68■■■■■ 4.58
CHST13-201ENST00000319340 UNC13AQ9UPW8 1703 aa42.98■■■■■ 4.47
CHST13-201ENST00000319340 BICRAQ9NZM4 1560 aa42.63■■■■■ 4.42
CHST13-201ENST00000319340 SUPT5HO00267 1087 aaKnown RBP42.55■■■■■ 4.4
CHST13-201ENST00000319340 PABPN1Q86U42 306 aaKnown RBP eCLIP42.53■■■■■ 4.4
CHST13-201ENST00000319340 CECR2Q9BXF3 1484 aa42.3■■■■■ 4.36
CHST13-201ENST00000319340 RSF1Q96T23 1441 aaPredicted RBP42.19■■■■■ 4.34
CHST13-201ENST00000319340 BAZ1AQ9NRL2 1556 aaPredicted RBP42.09■■■■■ 4.33
CHST13-201ENST00000319340 MROH2BQ7Z745 1585 aa42.04■■■■■ 4.32
CHST13-201ENST00000319340 SMARCA4P51532 1647 aa41.88■■■■■ 4.29
CHST13-201ENST00000319340 WIZO95785 1651 aa41.65■■■■■ 4.26
CHST13-201ENST00000319340 EIF4G1Q04637 1599 aaKnown RBP41.41■■■■■ 4.22
CHST13-201ENST00000319340 PEG3Q9GZU2 1588 aa41.41■■■■■ 4.22
CHST13-201ENST00000319340 TOP2AP11388 1531 aaKnown RBP41.29■■■■■ 4.2
CHST13-201ENST00000319340 SMARCA2P51531 1590 aa41.27■■■■■ 4.2
CHST13-201ENST00000319340 ATAD2BQ9ULI0 1458 aa41.27■■■■■ 4.2
CHST13-201ENST00000319340 BAZ1BQ9UIG0 1483 aaKnown RBP41.04■■■■■ 4.16
CHST13-201ENST00000319340 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
CHST13-201ENST00000319340 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
CHST13-201ENST00000319340 CCDC88BA6NC98 1476 aa40.86■■■■■ 4.13
CHST13-201ENST00000319340 CC2D2AQ9P2K1 1620 aa40.82■■■■■ 4.13
CHST13-201ENST00000319340 CHIC1Q5VXU3 224 aa40.65■■■■■ 4.1
CHST13-201ENST00000319340 TRIM41Q8WV44 630 aa40.07■■■■■ 4.01
CHST13-201ENST00000319340 CFTRP13569 1480 aa40.01■■■■□ 3.99
CHST13-201ENST00000319340 CADPSQ9ULU8 1353 aa39.92■■■■□ 3.98
CHST13-201ENST00000319340 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
CHST13-201ENST00000319340 ABCC8Q09428 1581 aa39.88■■■■□ 3.98
CHST13-201ENST00000319340 WRNQ14191 1432 aaPredicted RBP eCLIP39.75■■■■□ 3.95
CHST13-201ENST00000319340 PRDM2Q13029 1718 aa39.69■■■■□ 3.94
CHST13-201ENST00000319340 LAMC3Q9Y6N6 1575 aa39.59■■■■□ 3.93
CHST13-201ENST00000319340 NESP48681 1621 aa39.53■■■■□ 3.92
CHST13-201ENST00000319340 SYNJ1O43426 1573 aa39.51■■■■□ 3.91
CHST13-201ENST00000319340 FANCD2Q9BXW9 1451 aa39.45■■■■□ 3.91
CHST13-201ENST00000319340 TOP2BQ02880 1626 aa39.4■■■■□ 3.9
CHST13-201ENST00000319340 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
CHST13-201ENST00000319340 BIVM-ERCC5R4GMW8 1640 aa39.34■■■■□ 3.89
CHST13-201ENST00000319340 CUX1P39880 1505 aa39.33■■■■□ 3.89
CHST13-201ENST00000319340 FAM9AQ8IZU1 332 aaPredicted RBP39.27■■■■□ 3.88
CHST13-201ENST00000319340 CEP164Q9UPV0 1460 aa39.24■■■■□ 3.87
CHST13-201ENST00000319340 SOGA1O94964 1423 aa39.14■■■■□ 3.86
CHST13-201ENST00000319340 EEA1Q15075 1411 aa39.14■■■■□ 3.86
CHST13-201ENST00000319340 DNMBPQ6XZF7 1577 aa39.06■■■■□ 3.84
CHST13-201ENST00000319340 LOC105371045A0A1W2PR82 267 aa39.05■■■■□ 3.84
CHST13-201ENST00000319340 KIF21AQ7Z4S6 1674 aa39.02■■■■□ 3.84
CHST13-201ENST00000319340 TOPBP1Q92547 1522 aa38.99■■■■□ 3.83
CHST13-201ENST00000319340 RUSC2Q8N2Y8 1516 aa38.97■■■■□ 3.83
CHST13-201ENST00000319340 FGD5Q6ZNL6 1462 aa38.95■■■■□ 3.83
CHST13-201ENST00000319340 URB2Q14146 1524 aaKnown RBP38.93■■■■□ 3.82
CHST13-201ENST00000319340 CSRNP3Q8WYN3 585 aa38.92■■■■□ 3.82
CHST13-201ENST00000319340 MRC2Q9UBG0 1479 aa38.81■■■■□ 3.8
CHST13-201ENST00000319340 POLA1P09884 1462 aaPredicted RBP38.79■■■■□ 3.8
CHST13-201ENST00000319340 KIF27Q86VH2 1401 aa38.79■■■■□ 3.8
CHST13-201ENST00000319340 ERCC6Q03468 1493 aa38.76■■■■□ 3.8
CHST13-201ENST00000319340 CUX2O14529 1486 aa38.68■■■■□ 3.78
CHST13-201ENST00000319340 EHMT2Q96KQ7 1210 aa38.67■■■■□ 3.78
CHST13-201ENST00000319340 RAD54L2Q9Y4B4 1467 aa38.64■■■■□ 3.78
CHST13-201ENST00000319340 ABCA10Q8WWZ4 1543 aa38.62■■■■□ 3.77
CHST13-201ENST00000319340 WDR62O43379 1518 aa38.59■■■■□ 3.77
CHST13-201ENST00000319340 KIF21BO75037 1637 aa38.56■■■■□ 3.76
CHST13-201ENST00000319340 GOLGA3Q08378 1498 aa38.55■■■■□ 3.76
CHST13-201ENST00000319340 THOC2Q8NI27 1593 aaKnown RBP38.46■■■■□ 3.75
CHST13-201ENST00000319340 PRXQ9BXM0 1461 aa38.44■■■■□ 3.74
CHST13-201ENST00000319340 WDR97A6NE52 1622 aa38.43■■■■□ 3.74
CHST13-201ENST00000319340 IGF1RP08069 1367 aa38.43■■■■□ 3.74
CHST13-201ENST00000319340 TNIKQ9UKE5 1360 aa38.41■■■■□ 3.74
CHST13-201ENST00000319340 UBTFP17480 764 aaKnown RBP38.4■■■■□ 3.74
CHST13-201ENST00000319340 TARBP1Q13395 1621 aaKnown RBP38.39■■■■□ 3.74
CHST13-201ENST00000319340 RAPGEF2Q9Y4G8 1499 aa38.36■■■■□ 3.73
CHST13-201ENST00000319340 ERICH3Q5RHP9 1530 aa38.36■■■■□ 3.73
CHST13-201ENST00000319340 IFT140Q96RY7 1462 aa38.33■■■■□ 3.73
CHST13-201ENST00000319340 TDRD9Q8NDG6 1382 aaKnown RBP38.31■■■■□ 3.72
CHST13-201ENST00000319340 ABCA5Q8WWZ7 1642 aa38.27■■■■□ 3.72
CHST13-201ENST00000319340 GAPVD1Q14C86 1478 aa38.26■■■■□ 3.72
CHST13-201ENST00000319340 CARMIL1Q5VZK9 1371 aa38.25■■■■□ 3.71
CHST13-201ENST00000319340 CEP162Q5TB80 1403 aa38.14■■■■□ 3.7
CHST13-201ENST00000319340 CUL7Q14999 1698 aa38.13■■■■□ 3.69
CHST13-201ENST00000319340 AQRO60306 1485 aaKnown RBP eCLIP38.08■■■■□ 3.692e-7■■■■■ 29
CHST13-201ENST00000319340 ZNF608Q9ULD9 1512 aaPredicted RBP38.05■■■■□ 3.68
CHST13-201ENST00000319340 GRIN2BQ13224 1484 aa38■■■■□ 3.67
CHST13-201ENST00000319340 PBRM1Q86U86 1689 aa37.97■■■■□ 3.67
CHST13-201ENST00000319340 CLIP1P30622 1438 aa37.92■■■■□ 3.66
CHST13-201ENST00000319340 EIF4G3O43432 1585 aaKnown RBP37.91■■■■□ 3.66
CHST13-201ENST00000319340 FHAD1B1AJZ9 1412 aa37.87■■■■□ 3.65
CHST13-201ENST00000319340 ADAMTS12P58397 1594 aa37.8■■■■□ 3.64
CHST13-201ENST00000319340 RANGAP1P46060 587 aaPredicted RBP37.76■■■■□ 3.64
CHST13-201ENST00000319340 SNAPC4Q5SXM2 1469 aa37.73■■■■□ 3.63
CHST13-201ENST00000319340 MAGI1Q96QZ7 1491 aaPredicted RBP37.7■■■■□ 3.63
CHST13-201ENST00000319340 CTTNBP2Q8WZ74 1663 aa37.62■■■■□ 3.61
CHST13-201ENST00000319340 VPS8Q8N3P4 1428 aa37.56■■■■□ 3.6
CHST13-201ENST00000319340 ARHGAP35Q9NRY4 1499 aa37.56■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms