Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP4-1Q9BYQ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 WHAMMP3-201ENST00000611636 1609 ntBASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 AC087393.1-201ENST00000582896 145 ntBASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP4-1Q9BYQ7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP4-1Q9BYQ7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP4-1Q9BYQ7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 LONRF2P2-201ENST00000439212 571 ntBASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 AC019171.1-201ENST00000601251 1056 ntBASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP4-1Q9BYQ7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 RPS2P7-201ENST00000447334 885 ntBASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.84□□□□□ -0.35
KRTAP4-1Q9BYQ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP4-1Q9BYQ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP4-1Q9BYQ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
KRTAP4-1Q9BYQ7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
KRTAP4-1Q9BYQ7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms