RNA–Protein interactions for RNA: ENST00000354453.7

LAT-201, Transcript of linker for activation of T cells, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LAT, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAT-201ENST00000354453 NISCHQ9Y2I1 1504 aa57.54■■■■■ 6.8
LAT-201ENST00000354453 CCDC180Q9P1Z9 1646 aa50.63■■■■■ 5.7
LAT-201ENST00000354453 ABCC9O60706 1549 aa48.73■■■■■ 5.39
LAT-201ENST00000354453 ZCCHC6Q5VYS8 1495 aaKnown RBP48.17■■■■■ 5.3
LAT-201ENST00000354453 DCAF8L2P0C7V8 631 aa47.77■■■■■ 5.24
LAT-201ENST00000354453 DCAF1Q9Y4B6 1507 aa47.53■■■■■ 5.2
LAT-201ENST00000354453 NACADO15069 1562 aa47.33■■■■■ 5.17
LAT-201ENST00000354453 MYO15BQ96JP2 1530 aa47.31■■■■■ 5.16
LAT-201ENST00000354453 RB1CC1Q8TDY2 1594 aa47.17■■■■■ 5.14
LAT-201ENST00000354453 SCRIBQ14160 1630 aa46.48■■■■■ 5.03
LAT-201ENST00000354453 SHROOM4Q9ULL8 1493 aa46.31■■■■■ 5
LAT-201ENST00000354453 UNC13AQ9UPW8 1703 aa46.28■■■■■ 5
LAT-201ENST00000354453 BICRAQ9NZM4 1560 aa45.83■■■■■ 4.93
LAT-201ENST00000354453 PABPN1Q86U42 306 aaKnown RBP eCLIP45.74■■■■■ 4.91
LAT-201ENST00000354453 CECR2Q9BXF3 1484 aa44.83■■■■■ 4.77
LAT-201ENST00000354453 EIF4G1Q04637 1599 aaKnown RBP44.5■■■■■ 4.71
LAT-201ENST00000354453 BAZ1AQ9NRL2 1556 aaPredicted RBP44.49■■■■■ 4.71
LAT-201ENST00000354453 SMARCA4P51532 1647 aa44.46■■■■■ 4.71
LAT-201ENST00000354453 MROH2BQ7Z745 1585 aa44.45■■■■■ 4.71
LAT-201ENST00000354453 RSF1Q96T23 1441 aaPredicted RBP44.27■■■■■ 4.68
LAT-201ENST00000354453 CC2D2AQ9P2K1 1620 aa44.09■■■■■ 4.65
LAT-201ENST00000354453 WIZO95785 1651 aa44.06■■■■■ 4.64
LAT-201ENST00000354453 SUPT5HO00267 1087 aaKnown RBP44.02■■■■■ 4.64
LAT-201ENST00000354453 ATAD2BQ9ULI0 1458 aa43.93■■■■■ 4.62
LAT-201ENST00000354453 PEG3Q9GZU2 1588 aa43.92■■■■■ 4.62
LAT-201ENST00000354453 SMARCA2P51531 1590 aa43.86■■■■■ 4.61
LAT-201ENST00000354453 DNAJC5BQ9UF47 199 aa43.83■■■■■ 4.61
LAT-201ENST00000354453 NCAPD3P42695 1498 aa43.68■■■■■ 4.58
LAT-201ENST00000354453 BAZ1BQ9UIG0 1483 aaKnown RBP43.62■■■■■ 4.57
LAT-201ENST00000354453 HMGXB3Q12766 1538 aa43.58■■■■■ 4.57
LAT-201ENST00000354453 TOP2AP11388 1531 aaKnown RBP43.54■■■■■ 4.56
LAT-201ENST00000354453 CCDC88BA6NC98 1476 aa43.06■■■■■ 4.48
LAT-201ENST00000354453 NESP48681 1621 aa42.52■■■■■ 4.4
LAT-201ENST00000354453 CADPSQ9ULU8 1353 aa42.49■■■■■ 4.39
LAT-201ENST00000354453 CFTRP13569 1480 aa42.47■■■■■ 4.39
LAT-201ENST00000354453 LAMC3Q9Y6N6 1575 aa42.37■■■■■ 4.37
LAT-201ENST00000354453 PRDM2Q13029 1718 aa42.25■■■■■ 4.35
LAT-201ENST00000354453 FANCD2Q9BXW9 1451 aa42.06■■■■■ 4.32
LAT-201ENST00000354453 PDS5BQ9NTI5 1447 aa42.03■■■■■ 4.32
LAT-201ENST00000354453 KIF21AQ7Z4S6 1674 aa42.02■■■■■ 4.32
LAT-201ENST00000354453 ABCC8Q09428 1581 aa41.92■■■■■ 4.3
LAT-201ENST00000354453 CEP164Q9UPV0 1460 aa41.89■■■■■ 4.3
LAT-201ENST00000354453 ERCC6Q03468 1493 aa41.84■■■■■ 4.29
LAT-201ENST00000354453 WRNQ14191 1432 aaPredicted RBP eCLIP41.68■■■■■ 4.26
LAT-201ENST00000354453 CHIC1Q5VXU3 224 aa41.64■■■■■ 4.26
LAT-201ENST00000354453 SYNJ1O43426 1573 aa41.63■■■■■ 4.25
LAT-201ENST00000354453 CUX1P39880 1505 aa41.63■■■■■ 4.25
LAT-201ENST00000354453 URB2Q14146 1524 aaKnown RBP41.62■■■■■ 4.25
LAT-201ENST00000354453 MRC2Q9UBG0 1479 aa41.6■■■■■ 4.25
LAT-201ENST00000354453 THOC2Q8NI27 1593 aaKnown RBP41.57■■■■■ 4.25
LAT-201ENST00000354453 DNMBPQ6XZF7 1577 aa41.52■■■■■ 4.24
LAT-201ENST00000354453 TOPBP1Q92547 1522 aa41.51■■■■■ 4.24
LAT-201ENST00000354453 TOP2BQ02880 1626 aa41.49■■■■■ 4.23
LAT-201ENST00000354453 BIVM-ERCC5R4GMW8 1640 aa41.47■■■■■ 4.23
LAT-201ENST00000354453 WDR62O43379 1518 aa41.43■■■■■ 4.22
LAT-201ENST00000354453 TRIM41Q8WV44 630 aa41.41■■■■■ 4.22
LAT-201ENST00000354453 FGD5Q6ZNL6 1462 aa41.31■■■■■ 4.2
LAT-201ENST00000354453 POLA1P09884 1462 aaPredicted RBP41.24■■■■■ 4.19
LAT-201ENST00000354453 CUX2O14529 1486 aa41.11■■■■■ 4.17
LAT-201ENST00000354453 RAD54L2Q9Y4B4 1467 aa41.11■■■■■ 4.17
LAT-201ENST00000354453 SOGA1O94964 1423 aa41.04■■■■■ 4.16
LAT-201ENST00000354453 TARBP1Q13395 1621 aaKnown RBP40.99■■■■■ 4.15
LAT-201ENST00000354453 WDR97A6NE52 1622 aa40.92■■■■■ 4.14
LAT-201ENST00000354453 IFT140Q96RY7 1462 aa40.92■■■■■ 4.14
LAT-201ENST00000354453 ABCA10Q8WWZ4 1543 aa40.88■■■■■ 4.14
LAT-201ENST00000354453 RUSC2Q8N2Y8 1516 aa40.83■■■■■ 4.13
LAT-201ENST00000354453 ZNF608Q9ULD9 1512 aaPredicted RBP40.8■■■■■ 4.12
LAT-201ENST00000354453 TDRD9Q8NDG6 1382 aaKnown RBP40.77■■■■■ 4.12
LAT-201ENST00000354453 FAM9AQ8IZU1 332 aaPredicted RBP40.7■■■■■ 4.11
LAT-201ENST00000354453 ABCA5Q8WWZ7 1642 aa40.68■■■■■ 4.1
LAT-201ENST00000354453 AQRO60306 1485 aaKnown RBP eCLIP40.68■■■■■ 4.1
LAT-201ENST00000354453 KIF27Q86VH2 1401 aa40.68■■■■■ 4.1
LAT-201ENST00000354453 EIF4G3O43432 1585 aaKnown RBP40.65■■■■■ 4.1
LAT-201ENST00000354453 GAPVD1Q14C86 1478 aa40.6■■■■■ 4.09
LAT-201ENST00000354453 EEA1Q15075 1411 aa40.51■■■■■ 4.08
LAT-201ENST00000354453 PBRM1Q86U86 1689 aa40.51■■■■■ 4.08
LAT-201ENST00000354453 IGF1RP08069 1367 aa40.43■■■■■ 4.06
LAT-201ENST00000354453 GRIN2BQ13224 1484 aa40.42■■■■■ 4.06
LAT-201ENST00000354453 CSRNP3Q8WYN3 585 aa40.4■■■■■ 4.06
LAT-201ENST00000354453 ERICH3Q5RHP9 1530 aa40.39■■■■■ 4.06
LAT-201ENST00000354453 SNAPC4Q5SXM2 1469 aa40.31■■■■■ 4.04
LAT-201ENST00000354453 CUL7Q14999 1698 aa40.24■■■■■ 4.03
LAT-201ENST00000354453 ADAMTS12P58397 1594 aa40.23■■■■■ 4.03
LAT-201ENST00000354453 EHMT2Q96KQ7 1210 aa40.21■■■■■ 4.03
LAT-201ENST00000354453 PRXQ9BXM0 1461 aa40.21■■■■■ 4.03
LAT-201ENST00000354453 CARMIL1Q5VZK9 1371 aa40.2■■■■■ 4.03
LAT-201ENST00000354453 MAGI1Q96QZ7 1491 aaPredicted RBP40.18■■■■■ 4.02
LAT-201ENST00000354453 KIF21BO75037 1637 aa40.13■■■■■ 4.01
LAT-201ENST00000354453 FHAD1B1AJZ9 1412 aa40.12■■■■■ 4.01
LAT-201ENST00000354453 RAPGEF2Q9Y4G8 1499 aa40.11■■■■■ 4.01
LAT-201ENST00000354453 SYNJ2O15056 1496 aa40.04■■■■■ 4
LAT-201ENST00000354453 LOC105371045A0A1W2PR82 267 aa40.02■■■■■ 4
LAT-201ENST00000354453 FBLN2P98095 1184 aa39.98■■■■□ 3.99
LAT-201ENST00000354453 GOLGA3Q08378 1498 aa39.98■■■■□ 3.99
LAT-201ENST00000354453 CHD1O14646 1710 aa39.96■■■■□ 3.99
LAT-201ENST00000354453 GRIN2AQ12879 1464 aa39.94■■■■□ 3.99
LAT-201ENST00000354453 CHMP7Q8WUX9 453 aaPredicted RBP39.94■■■■□ 3.98
LAT-201ENST00000354453 UBTFP17480 764 aaKnown RBP39.81■■■■□ 3.96
LAT-201ENST00000354453 CEP170Q5SW79 1584 aa39.77■■■■□ 3.96
LAT-201ENST00000354453 CTTNBP2Q8WZ74 1663 aa39.69■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms