RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 NISCHQ9Y2I1 1504 aa57.54■■■■■ 6.8
RBFOX2-209ENST00000438146 CCDC180Q9P1Z9 1646 aa50.99■■■■■ 5.75
RBFOX2-209ENST00000438146 ABCC9O60706 1549 aa49.96■■■■■ 5.59
RBFOX2-209ENST00000438146 DCAF8L2P0C7V8 631 aa48.24■■■■■ 5.31
RBFOX2-209ENST00000438146 RB1CC1Q8TDY2 1594 aa47.98■■■■■ 5.27
RBFOX2-209ENST00000438146 ZCCHC6Q5VYS8 1495 aaKnown RBP47.96■■■■■ 5.27
RBFOX2-209ENST00000438146 NACADO15069 1562 aa47.94■■■■■ 5.26
RBFOX2-209ENST00000438146 MYO15BQ96JP2 1530 aa47.62■■■■■ 5.21
RBFOX2-209ENST00000438146 DCAF1Q9Y4B6 1507 aa47.51■■■■■ 5.2
RBFOX2-209ENST00000438146 UNC13AQ9UPW8 1703 aa46.89■■■■■ 5.1
RBFOX2-209ENST00000438146 PABPN1Q86U42 306 aaKnown RBP eCLIP46.77■■■■■ 5.08
RBFOX2-209ENST00000438146 SCRIBQ14160 1630 aa46.72■■■■■ 5.07
RBFOX2-209ENST00000438146 BICRAQ9NZM4 1560 aa46.56■■■■■ 5.04
RBFOX2-209ENST00000438146 SHROOM4Q9ULL8 1493 aa45.94■■■■■ 4.94
RBFOX2-209ENST00000438146 DNAJC5BQ9UF47 199 aa45.73■■■■■ 4.91
RBFOX2-209ENST00000438146 EIF4G1Q04637 1599 aaKnown RBP45.32■■■■■ 4.85
RBFOX2-209ENST00000438146 CC2D2AQ9P2K1 1620 aa45.12■■■■■ 4.81
RBFOX2-209ENST00000438146 CECR2Q9BXF3 1484 aa44.89■■■■■ 4.78
RBFOX2-209ENST00000438146 SMARCA4P51532 1647 aa44.61■■■■■ 4.73
RBFOX2-209ENST00000438146 BAZ1AQ9NRL2 1556 aaPredicted RBP44.57■■■■■ 4.72
RBFOX2-209ENST00000438146 MROH2BQ7Z745 1585 aa44.41■■■■■ 4.7
RBFOX2-209ENST00000438146 ATAD2BQ9ULI0 1458 aa44.35■■■■■ 4.69
RBFOX2-209ENST00000438146 NCAPD3P42695 1498 aa44.25■■■■■ 4.67
RBFOX2-209ENST00000438146 SMARCA2P51531 1590 aa44.25■■■■■ 4.67
RBFOX2-209ENST00000438146 PEG3Q9GZU2 1588 aa44.09■■■■■ 4.65
RBFOX2-209ENST00000438146 HMGXB3Q12766 1538 aa44.03■■■■■ 4.64
RBFOX2-209ENST00000438146 BAZ1BQ9UIG0 1483 aaKnown RBP44.01■■■■■ 4.64
RBFOX2-209ENST00000438146 RSF1Q96T23 1441 aaPredicted RBP43.94■■■■■ 4.62
RBFOX2-209ENST00000438146 WIZO95785 1651 aa43.94■■■■■ 4.62
RBFOX2-209ENST00000438146 TOP2AP11388 1531 aaKnown RBP43.43■■■■■ 4.54
RBFOX2-209ENST00000438146 NESP48681 1621 aa43.27■■■■■ 4.52
RBFOX2-209ENST00000438146 SUPT5HO00267 1087 aaKnown RBP43.11■■■■■ 4.49
RBFOX2-209ENST00000438146 LAMC3Q9Y6N6 1575 aa43.05■■■■■ 4.48
RBFOX2-209ENST00000438146 ERCC6Q03468 1493 aa43.02■■■■■ 4.48
RBFOX2-209ENST00000438146 CADPSQ9ULU8 1353 aa43.02■■■■■ 4.48
RBFOX2-209ENST00000438146 CCDC88BA6NC98 1476 aa42.96■■■■■ 4.47
RBFOX2-209ENST00000438146 PDS5BQ9NTI5 1447 aa42.79■■■■■ 4.44
RBFOX2-209ENST00000438146 CFTRP13569 1480 aa42.77■■■■■ 4.44
RBFOX2-209ENST00000438146 KIF21AQ7Z4S6 1674 aa42.69■■■■■ 4.42
RBFOX2-209ENST00000438146 FANCD2Q9BXW9 1451 aa42.55■■■■■ 4.4
RBFOX2-209ENST00000438146 THOC2Q8NI27 1593 aaKnown RBP42.49■■■■■ 4.39
RBFOX2-209ENST00000438146 CEP164Q9UPV0 1460 aa42.47■■■■■ 4.39
RBFOX2-209ENST00000438146 CUX2O14529 1486 aa42.39■■■■■ 4.38
RBFOX2-209ENST00000438146 PRDM2Q13029 1718 aa42.37■■■■■ 4.37
RBFOX2-209ENST00000438146 MRC2Q9UBG0 1479 aa42.37■■■■■ 4.37
RBFOX2-209ENST00000438146 WDR62O43379 1518 aa42.19■■■■■ 4.34
RBFOX2-209ENST00000438146 URB2Q14146 1524 aaKnown RBP42.13■■■■■ 4.33
RBFOX2-209ENST00000438146 TOPBP1Q92547 1522 aa41.88■■■■■ 4.29
RBFOX2-209ENST00000438146 DNMBPQ6XZF7 1577 aa41.81■■■■■ 4.28
RBFOX2-209ENST00000438146 ABCC8Q09428 1581 aa41.8■■■■■ 4.28
RBFOX2-209ENST00000438146 CUX1P39880 1505 aa41.64■■■■■ 4.26
RBFOX2-209ENST00000438146 IFT140Q96RY7 1462 aa41.55■■■■■ 4.24
RBFOX2-209ENST00000438146 POLA1P09884 1462 aaPredicted RBP41.54■■■■■ 4.24
RBFOX2-209ENST00000438146 FGD5Q6ZNL6 1462 aa41.49■■■■■ 4.23
RBFOX2-209ENST00000438146 ZNF608Q9ULD9 1512 aaPredicted RBP41.43■■■■■ 4.22
RBFOX2-209ENST00000438146 WRNQ14191 1432 aaPredicted RBP eCLIP41.43■■■■■ 4.22
RBFOX2-209ENST00000438146 RAD54L2Q9Y4B4 1467 aa41.42■■■■■ 4.22
RBFOX2-209ENST00000438146 SOGA1O94964 1423 aa41.39■■■■■ 4.22
RBFOX2-209ENST00000438146 TARBP1Q13395 1621 aaKnown RBP41.38■■■■■ 4.21
RBFOX2-209ENST00000438146 SYNJ1O43426 1573 aa41.34■■■■■ 4.21
RBFOX2-209ENST00000438146 TOP2BQ02880 1626 aa41.27■■■■■ 4.2
RBFOX2-209ENST00000438146 BIVM-ERCC5R4GMW8 1640 aa41.24■■■■■ 4.19
RBFOX2-209ENST00000438146 AQRO60306 1485 aaKnown RBP eCLIP41.22■■■■■ 4.19
RBFOX2-209ENST00000438146 EIF4G3O43432 1585 aaKnown RBP41.22■■■■■ 4.19
RBFOX2-209ENST00000438146 TDRD9Q8NDG6 1382 aaKnown RBP41.19■■■■■ 4.19
RBFOX2-209ENST00000438146 WDR97A6NE52 1622 aa41.05■■■■■ 4.16
RBFOX2-209ENST00000438146 ABCA10Q8WWZ4 1543 aa41.03■■■■■ 4.16
RBFOX2-209ENST00000438146 DNAJC5Q9H3Z4 198 aa40.98■■■■■ 4.15
RBFOX2-209ENST00000438146 GAPVD1Q14C86 1478 aa40.89■■■■■ 4.14
RBFOX2-209ENST00000438146 GRIN2BQ13224 1484 aa40.85■■■■■ 4.13
RBFOX2-209ENST00000438146 ABCA5Q8WWZ7 1642 aa40.85■■■■■ 4.13
RBFOX2-209ENST00000438146 SNAPC4Q5SXM2 1469 aa40.83■■■■■ 4.13
RBFOX2-209ENST00000438146 FBLN2P98095 1184 aa40.77■■■■■ 4.12
RBFOX2-209ENST00000438146 PBRM1Q86U86 1689 aa40.76■■■■■ 4.12
RBFOX2-209ENST00000438146 OSCARQ8IYS5 282 aa40.75■■■■■ 4.11
RBFOX2-209ENST00000438146 MAGI1Q96QZ7 1491 aaPredicted RBP40.69■■■■■ 4.11
RBFOX2-209ENST00000438146 CHD1O14646 1710 aa40.66■■■■■ 4.1
RBFOX2-209ENST00000438146 TRIM41Q8WV44 630 aa40.63■■■■■ 4.1
RBFOX2-209ENST00000438146 CHMP7Q8WUX9 453 aaPredicted RBP40.61■■■■■ 4.09
RBFOX2-209ENST00000438146 SYNJ2O15056 1496 aa40.57■■■■■ 4.08
RBFOX2-209ENST00000438146 KIF27Q86VH2 1401 aa40.54■■■■■ 4.08
RBFOX2-209ENST00000438146 ERICH3Q5RHP9 1530 aa40.52■■■■■ 4.08
RBFOX2-209ENST00000438146 ADAMTS12P58397 1594 aa40.48■■■■■ 4.07
RBFOX2-209ENST00000438146 FHAD1B1AJZ9 1412 aa40.41■■■■■ 4.06
RBFOX2-209ENST00000438146 IGF1RP08069 1367 aa40.36■■■■■ 4.05
RBFOX2-209ENST00000438146 GRIN2AQ12879 1464 aa40.33■■■■■ 4.05
RBFOX2-209ENST00000438146 RUSC2Q8N2Y8 1516 aa40.31■■■■■ 4.04
RBFOX2-209ENST00000438146 CHIC1Q5VXU3 224 aa40.23■■■■■ 4.03
RBFOX2-209ENST00000438146 CLASP1Q7Z460 1538 aa40.21■■■■■ 4.03
RBFOX2-209ENST00000438146 CUL7Q14999 1698 aa40.18■■■■■ 4.02
RBFOX2-209ENST00000438146 CARMIL1Q5VZK9 1371 aa40.15■■■■■ 4.02
RBFOX2-209ENST00000438146 CEP170Q5SW79 1584 aa40.14■■■■■ 4.02
RBFOX2-209ENST00000438146 NUP160Q12769 1436 aa40.12■■■■■ 4.01
RBFOX2-209ENST00000438146 ARHGEF11O15085 1522 aa40.07■■■■■ 4.01
RBFOX2-209ENST00000438146 RIMBP3CA6NJZ7 1639 aa40.07■■■■■ 4
RBFOX2-209ENST00000438146 RIMBP3BA6NNM3 1639 aa40.07■■■■■ 4
RBFOX2-209ENST00000438146 RIMBP3Q9UFD9 1639 aa40.07■■■■■ 4
RBFOX2-209ENST00000438146 FAM9AQ8IZU1 332 aaPredicted RBP39.9■■■■□ 3.98
RBFOX2-209ENST00000438146 RAPGEF2Q9Y4G8 1499 aa39.89■■■■□ 3.98
RBFOX2-209ENST00000438146 CSRNP3Q8WYN3 585 aa39.84■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms