Protein–RNA interactions for Protein: Q4G0J3

LARP7, La-related protein 7, humanhuman

Known RBP eCLIP

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP7Q4G0J3 SRRM2-209ENST00000572278 711 ntTSL 29.64□□□□□ -0.873e-6■■■□□ 15
LARP7Q4G0J3 SRRM2-215ENST00000573498 994 ntTSL 37.49□□□□□ -1.213e-6■■■□□ 15
LARP7Q4G0J3 ALB-211ENST00000505649 1509 ntTSL 55.92□□□□□ -1.465e-40■■■□□ 14.8
LARP7Q4G0J3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-7■■■□□ 14.7
LARP7Q4G0J3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-7■■■□□ 14.7
LARP7Q4G0J3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.46□□□□□ -0.261e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.41□□□□□ -0.261e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-203ENST00000392017 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.581e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.631e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-215ENST00000479942 3559 ntTSL 1 (best)10.54□□□□□ -0.721e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC10.46□□□□□ -0.741e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-206ENST00000392021 3301 ntTSL 1 (best)10.26□□□□□ -0.771e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-214ENST00000474148 4208 ntTSL 29.65□□□□□ -0.861e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-211ENST00000464645 560 ntTSL 48.7□□□□□ -1.021e-14■■■□□ 14.6
LARP7Q4G0J3 ATG16L1-218ENST00000498620 740 ntTSL 57.8□□□□□ -1.161e-14■■■□□ 14.6
LARP7Q4G0J3 RPL4-202ENST00000561554 580 ntTSL 410.75□□□□□ -0.691e-323■■□□□ 14.5
LARP7Q4G0J3 RPL4-213ENST00000566624 819 ntTSL 210.57□□□□□ -0.721e-323■■□□□ 14.5
LARP7Q4G0J3 SNORD16-201ENST00000362803 99 ntBASIC6.11□□□□□ -1.431e-323■■□□□ 14.5
LARP7Q4G0J3 SLC6A8-207ENST00000466243 544 ntTSL 213.26□□□□□ -0.292e-8■■□□□ 14.5
LARP7Q4G0J3 ALB-204ENST00000441319 591 ntTSL 49.13□□□□□ -0.956e-40■■□□□ 14.5
LARP7Q4G0J3 ALB-215ENST00000510166 532 ntTSL 38.65□□□□□ -1.026e-40■■□□□ 14.5
LARP7Q4G0J3 ALB-218ENST00000515133 665 ntTSL 27.9□□□□□ -1.146e-40■■□□□ 14.5
LARP7Q4G0J3 ALB-217ENST00000514786 577 ntTSL 46.37□□□□□ -1.396e-40■■□□□ 14.5
LARP7Q4G0J3 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)26.95■■□□□ 1.911e-8■■□□□ 14.4
LARP7Q4G0J3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.341e-8■■□□□ 14.4
LARP7Q4G0J3 RPS3-208ENST00000527273 390 ntTSL 311.31□□□□□ -0.62e-6■■□□□ 14.2
LARP7Q4G0J3 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.49□□□□□ -0.892e-6■■□□□ 14.2
LARP7Q4G0J3 SQSTM1-215ENST00000514093 842 ntTSL 520.02■□□□□ 0.88e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.548e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-204ENST00000453046 572 ntTSL 417.51■□□□□ 0.398e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-209ENST00000504627 602 ntTSL 517.51■□□□□ 0.398e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-212ENST00000508284 578 ntTSL 417.51■□□□□ 0.398e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.8■□□□□ 0.128e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-205ENST00000464493 532 ntTSL 413.98□□□□□ -0.178e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-207ENST00000481335 562 ntTSL 411.89□□□□□ -0.518e-7■■□□□ 14.1
LARP7Q4G0J3 SQSTM1-203ENST00000422245 628 ntTSL 411.32□□□□□ -0.68e-7■■□□□ 14.1
LARP7Q4G0J3 MIR4449-201ENST00000578365 66 ntBASIC25.01■■□□□ 1.591e-56■■□□□ 14
LARP7Q4G0J3 SNORD56-201ENST00000413522 71 ntBASIC4.78□□□□□ -1.641e-323■■□□□ 14
LARP7Q4G0J3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.916e-17■■□□□ 13.9
LARP7Q4G0J3 APOH-204ENST00000585162 407 ntTSL 24.65□□□□□ -1.676e-17■■□□□ 13.9
LARP7Q4G0J3 DDX39B-206ENST00000419338 928 ntTSL 513.88□□□□□ -0.191e-30■■□□□ 13.8
LARP7Q4G0J3 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.431e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-219ENST00000481456 5158 ntTSL 212.29□□□□□ -0.441e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.481e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-208ENST00000428098 817 ntTSL 311.8□□□□□ -0.521e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-212ENST00000456662 932 ntTSL 511.8□□□□□ -0.521e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-210ENST00000431908 914 ntTSL 511.65□□□□□ -0.541e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC10.69□□□□□ -0.71e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-220ENST00000482195 1232 ntTSL 210.13□□□□□ -0.791e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.911e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-215ENST00000462256 4027 ntTSL 28.82□□□□□ -11e-30■■□□□ 13.8
LARP7Q4G0J3 DDX39B-207ENST00000427214 1005 ntTSL 56.47□□□□□ -1.371e-30■■□□□ 13.8
LARP7Q4G0J3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.28■□□□□ 0.043e-35■■□□□ 13.8
LARP7Q4G0J3 SNHG22-202ENST00000615535 421 nt14.98□□□□□ -0.013e-35■■□□□ 13.8
LARP7Q4G0J3 SCARNA17-201ENST00000516183 144 ntBASIC-1.13□□□□□ -2.593e-35■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.54■□□□□ 0.562e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.52e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.272e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.392e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.442e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.482e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-214ENST00000551123 1417 ntTSL 1 (best)11.77□□□□□ -0.522e-12■■□□□ 13.8
LARP7Q4G0J3 SLC25A3-204ENST00000546766 3236 ntTSL 1 (best)10.01□□□□□ -0.812e-12■■□□□ 13.8
LARP7Q4G0J3 SNORA53-201ENST00000391141 249 ntBASIC4.16□□□□□ -1.742e-12■■□□□ 13.8
LARP7Q4G0J3 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.593e-6■■□□□ 13.7
LARP7Q4G0J3 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC9.67□□□□□ -0.863e-6■■□□□ 13.7
LARP7Q4G0J3 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.083e-6■■□□□ 13.7
LARP7Q4G0J3 SPP1-209ENST00000509659 1664 ntTSL 1 (best)8.33□□□□□ -1.083e-6■■□□□ 13.7
LARP7Q4G0J3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.32□□□□□ -1.43e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.74■□□□□ 0.274e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.23■□□□□ 0.034e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.084e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.36□□□□□ -0.114e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.22□□□□□ -0.134e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.19□□□□□ -0.34e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.474e-6■■□□□ 13.7
LARP7Q4G0J3 OS9-210ENST00000549307 3870 ntTSL 29.27□□□□□ -0.934e-6■■□□□ 13.7
LARP7Q4G0J3 SNHG1-221ENST00000544983 870 ntTSL 211.28□□□□□ -0.61e-323■■□□□ 13.7
LARP7Q4G0J3 SNHG1-215ENST00000540904 594 ntTSL 58.91□□□□□ -0.981e-323■■□□□ 13.7
LARP7Q4G0J3 SNORD26-201ENST00000384147 75 ntBASIC1.6□□□□□ -2.151e-323■■□□□ 13.7
LARP7Q4G0J3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-8■■□□□ 13.7
LARP7Q4G0J3 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.141e-75■■□□□ 13.6
LARP7Q4G0J3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.161e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-203ENST00000420199 1002 ntTSL 314.98□□□□□ -0.011e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-215ENST00000623163 851 ntTSL 514.16□□□□□ -0.141e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-209ENST00000435947 696 ntTSL 213.55□□□□□ -0.241e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC12.32□□□□□ -0.441e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-210ENST00000453754 401 ntTSL 311.9□□□□□ -0.51e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-206ENST00000428833 641 ntTSL 211.89□□□□□ -0.511e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC11.52□□□□□ -0.571e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-207ENST00000431043 998 ntTSL 211.52□□□□□ -0.571e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC11□□□□□ -0.651e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-202ENST00000414002 430 ntTSL 29.57□□□□□ -0.881e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-220ENST00000624128 672 ntTSL 29.46□□□□□ -0.91e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-217ENST00000623650 886 ntTSL 59.35□□□□□ -0.911e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.42□□□□□ -1.061e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.91□□□□□ -1.141e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-205ENST00000427501 680 ntTSL 26.61□□□□□ -1.351e-30■■□□□ 13.4
LARP7Q4G0J3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.12□□□□□ -1.431e-30■■□□□ 13.4
Retrieved 100 of 2,094 protein–RNA pairs in 39 ms