RNA–Protein interactions for RNA: ENST00000466243.1

SLC6A8-207, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-207ENST00000466243 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
SLC6A8-207ENST00000466243 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
SLC6A8-207ENST00000466243 ABCC9O60706 1549 aa29.41■■■□□ 2.3
SLC6A8-207ENST00000466243 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
SLC6A8-207ENST00000466243 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SLC6A8-207ENST00000466243 NACADO15069 1562 aa28.03■■■□□ 2.08
SLC6A8-207ENST00000466243 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
SLC6A8-207ENST00000466243 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
SLC6A8-207ENST00000466243 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
SLC6A8-207ENST00000466243 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
SLC6A8-207ENST00000466243 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
SLC6A8-207ENST00000466243 BICRAQ9NZM4 1560 aa27.23■■□□□ 1.95
SLC6A8-207ENST00000466243 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
SLC6A8-207ENST00000466243 SCRIBQ14160 1630 aa27.14■■□□□ 1.94
SLC6A8-207ENST00000466243 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
SLC6A8-207ENST00000466243 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
SLC6A8-207ENST00000466243 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
SLC6A8-207ENST00000466243 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
SLC6A8-207ENST00000466243 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
SLC6A8-207ENST00000466243 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
SLC6A8-207ENST00000466243 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
SLC6A8-207ENST00000466243 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
SLC6A8-207ENST00000466243 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
SLC6A8-207ENST00000466243 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
SLC6A8-207ENST00000466243 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
SLC6A8-207ENST00000466243 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
SLC6A8-207ENST00000466243 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.69
SLC6A8-207ENST00000466243 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
SLC6A8-207ENST00000466243 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
SLC6A8-207ENST00000466243 WIZO95785 1651 aa25.37■■□□□ 1.65
SLC6A8-207ENST00000466243 NESP48681 1621 aa25.36■■□□□ 1.65
SLC6A8-207ENST00000466243 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
SLC6A8-207ENST00000466243 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
SLC6A8-207ENST00000466243 CUX2O14529 1486 aa25.15■■□□□ 1.62
SLC6A8-207ENST00000466243 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
SLC6A8-207ENST00000466243 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
SLC6A8-207ENST00000466243 CFTRP13569 1480 aa24.95■■□□□ 1.58
SLC6A8-207ENST00000466243 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
SLC6A8-207ENST00000466243 KIF21AQ7Z4S6 1674 aa24.9■■□□□ 1.58
SLC6A8-207ENST00000466243 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
SLC6A8-207ENST00000466243 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
SLC6A8-207ENST00000466243 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
SLC6A8-207ENST00000466243 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
SLC6A8-207ENST00000466243 WDR62O43379 1518 aa24.75■■□□□ 1.55
SLC6A8-207ENST00000466243 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
SLC6A8-207ENST00000466243 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
SLC6A8-207ENST00000466243 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
SLC6A8-207ENST00000466243 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
SLC6A8-207ENST00000466243 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
SLC6A8-207ENST00000466243 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
SLC6A8-207ENST00000466243 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
SLC6A8-207ENST00000466243 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
SLC6A8-207ENST00000466243 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
SLC6A8-207ENST00000466243 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
SLC6A8-207ENST00000466243 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
SLC6A8-207ENST00000466243 SOGA1O94964 1423 aa24.15■■□□□ 1.46
SLC6A8-207ENST00000466243 CUX1P39880 1505 aa24.15■■□□□ 1.46
SLC6A8-207ENST00000466243 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
SLC6A8-207ENST00000466243 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
SLC6A8-207ENST00000466243 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.452e-18■■■■■ 42.7
SLC6A8-207ENST00000466243 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
SLC6A8-207ENST00000466243 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
SLC6A8-207ENST00000466243 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
SLC6A8-207ENST00000466243 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
SLC6A8-207ENST00000466243 FBLN2P98095 1184 aa23.95■■□□□ 1.42
SLC6A8-207ENST00000466243 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
SLC6A8-207ENST00000466243 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
SLC6A8-207ENST00000466243 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
SLC6A8-207ENST00000466243 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
SLC6A8-207ENST00000466243 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
SLC6A8-207ENST00000466243 GAPVD1Q14C86 1478 aa23.84■■□□□ 1.41
SLC6A8-207ENST00000466243 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
SLC6A8-207ENST00000466243 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
SLC6A8-207ENST00000466243 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
SLC6A8-207ENST00000466243 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
SLC6A8-207ENST00000466243 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
SLC6A8-207ENST00000466243 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
SLC6A8-207ENST00000466243 CHD1O14646 1710 aa23.73■■□□□ 1.39
SLC6A8-207ENST00000466243 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
SLC6A8-207ENST00000466243 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
SLC6A8-207ENST00000466243 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
SLC6A8-207ENST00000466243 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
SLC6A8-207ENST00000466243 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
SLC6A8-207ENST00000466243 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
SLC6A8-207ENST00000466243 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
SLC6A8-207ENST00000466243 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
SLC6A8-207ENST00000466243 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
SLC6A8-207ENST00000466243 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
SLC6A8-207ENST00000466243 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
SLC6A8-207ENST00000466243 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
SLC6A8-207ENST00000466243 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
SLC6A8-207ENST00000466243 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
SLC6A8-207ENST00000466243 NUP160Q12769 1436 aa23.46■■□□□ 1.35
SLC6A8-207ENST00000466243 IGF1RP08069 1367 aa23.43■■□□□ 1.34
SLC6A8-207ENST00000466243 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
SLC6A8-207ENST00000466243 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
SLC6A8-207ENST00000466243 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
SLC6A8-207ENST00000466243 ERCC6L2Q5T890 1561 aa23.24■■□□□ 1.31
SLC6A8-207ENST00000466243 CUL7Q14999 1698 aa23.24■■□□□ 1.31
SLC6A8-207ENST00000466243 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms