RNA–Protein interactions for RNA: ENST00000428833.5

SNHG5-206, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 2

Gene SNHG5, Length 641 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-206ENST00000428833 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
SNHG5-206ENST00000428833 ABCC9O60706 1549 aa27.02■■□□□ 1.92
SNHG5-206ENST00000428833 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
SNHG5-206ENST00000428833 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
SNHG5-206ENST00000428833 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
SNHG5-206ENST00000428833 NACADO15069 1562 aa25.49■■□□□ 1.67
SNHG5-206ENST00000428833 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
SNHG5-206ENST00000428833 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
SNHG5-206ENST00000428833 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
SNHG5-206ENST00000428833 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
SNHG5-206ENST00000428833 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
SNHG5-206ENST00000428833 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
SNHG5-206ENST00000428833 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
SNHG5-206ENST00000428833 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
SNHG5-206ENST00000428833 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
SNHG5-206ENST00000428833 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
SNHG5-206ENST00000428833 CECR2Q9BXF3 1484 aa24.33■■□□□ 1.49
SNHG5-206ENST00000428833 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
SNHG5-206ENST00000428833 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
SNHG5-206ENST00000428833 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
SNHG5-206ENST00000428833 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
SNHG5-206ENST00000428833 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
SNHG5-206ENST00000428833 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
SNHG5-206ENST00000428833 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
SNHG5-206ENST00000428833 HMGXB3Q12766 1538 aa23.33■■□□□ 1.33
SNHG5-206ENST00000428833 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
SNHG5-206ENST00000428833 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
SNHG5-206ENST00000428833 CUX2O14529 1486 aa23.27■■□□□ 1.32
SNHG5-206ENST00000428833 NESP48681 1621 aa23.16■■□□□ 1.3
SNHG5-206ENST00000428833 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.29
SNHG5-206ENST00000428833 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
SNHG5-206ENST00000428833 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
SNHG5-206ENST00000428833 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
SNHG5-206ENST00000428833 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
SNHG5-206ENST00000428833 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
SNHG5-206ENST00000428833 WIZO95785 1651 aa22.85■■□□□ 1.25
SNHG5-206ENST00000428833 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
SNHG5-206ENST00000428833 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
SNHG5-206ENST00000428833 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
SNHG5-206ENST00000428833 CEP164Q9UPV0 1460 aa22.64■■□□□ 1.21
SNHG5-206ENST00000428833 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
SNHG5-206ENST00000428833 WDR62O43379 1518 aa22.58■■□□□ 1.21
SNHG5-206ENST00000428833 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
SNHG5-206ENST00000428833 CFTRP13569 1480 aa22.54■■□□□ 1.2
SNHG5-206ENST00000428833 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
SNHG5-206ENST00000428833 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
SNHG5-206ENST00000428833 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SNHG5-206ENST00000428833 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
SNHG5-206ENST00000428833 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
SNHG5-206ENST00000428833 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
SNHG5-206ENST00000428833 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
SNHG5-206ENST00000428833 TOPBP1Q92547 1522 aa22.14■■□□□ 1.13
SNHG5-206ENST00000428833 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
SNHG5-206ENST00000428833 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
SNHG5-206ENST00000428833 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
SNHG5-206ENST00000428833 FBLN2P98095 1184 aa21.95■■□□□ 1.1
SNHG5-206ENST00000428833 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.13e-11■■■■□ 23
SNHG5-206ENST00000428833 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
SNHG5-206ENST00000428833 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
SNHG5-206ENST00000428833 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
SNHG5-206ENST00000428833 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
SNHG5-206ENST00000428833 SOGA1O94964 1423 aa21.89■■□□□ 1.09
SNHG5-206ENST00000428833 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
SNHG5-206ENST00000428833 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
SNHG5-206ENST00000428833 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
SNHG5-206ENST00000428833 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
SNHG5-206ENST00000428833 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
SNHG5-206ENST00000428833 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
SNHG5-206ENST00000428833 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
SNHG5-206ENST00000428833 CHD1O14646 1710 aa21.79■■□□□ 1.08
SNHG5-206ENST00000428833 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
SNHG5-206ENST00000428833 CUX1P39880 1505 aa21.72■■□□□ 1.07
SNHG5-206ENST00000428833 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
SNHG5-206ENST00000428833 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
SNHG5-206ENST00000428833 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
SNHG5-206ENST00000428833 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
SNHG5-206ENST00000428833 TRHP20396 242 aaPredicted RBP21.64■■□□□ 1.05
SNHG5-206ENST00000428833 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
SNHG5-206ENST00000428833 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
SNHG5-206ENST00000428833 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
SNHG5-206ENST00000428833 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
SNHG5-206ENST00000428833 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
SNHG5-206ENST00000428833 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.04
SNHG5-206ENST00000428833 PBRM1Q86U86 1689 aa21.51■■□□□ 1.03
SNHG5-206ENST00000428833 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
SNHG5-206ENST00000428833 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
SNHG5-206ENST00000428833 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
SNHG5-206ENST00000428833 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
SNHG5-206ENST00000428833 GRIN2AQ12879 1464 aa21.36■■□□□ 1.01
SNHG5-206ENST00000428833 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
SNHG5-206ENST00000428833 ADAMTS12P58397 1594 aa21.31■■□□□ 1
SNHG5-206ENST00000428833 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
SNHG5-206ENST00000428833 NUP160Q12769 1436 aa21.26■□□□□ 0.99
SNHG5-206ENST00000428833 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
SNHG5-206ENST00000428833 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
SNHG5-206ENST00000428833 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
SNHG5-206ENST00000428833 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
SNHG5-206ENST00000428833 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
SNHG5-206ENST00000428833 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNHG5-206ENST00000428833 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms