RNA–Protein interactions for RNA: ENST00000509659.5

SPP1-209, Transcript of secreted phosphoprotein 1, humanhuman

TSL 1 (best)

Gene SPP1, Length 1,664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-209ENST00000509659 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
SPP1-209ENST00000509659 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
SPP1-209ENST00000509659 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
SPP1-209ENST00000509659 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
SPP1-209ENST00000509659 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
SPP1-209ENST00000509659 FOXD1Q16676 465 aa20.18■□□□□ 0.82
SPP1-209ENST00000509659 ADRA2BP18089 450 aa19.44■□□□□ 0.7
SPP1-209ENST00000509659 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
SPP1-209ENST00000509659 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
SPP1-209ENST00000509659 MSH5O43196 834 aa18.58■□□□□ 0.57
SPP1-209ENST00000509659 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
SPP1-209ENST00000509659 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
SPP1-209ENST00000509659 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.42
SPP1-209ENST00000509659 KCNA4P22459 653 aa17.53■□□□□ 0.4
SPP1-209ENST00000509659 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
SPP1-209ENST00000509659 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
SPP1-209ENST00000509659 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.37
SPP1-209ENST00000509659 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
SPP1-209ENST00000509659 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
SPP1-209ENST00000509659 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
SPP1-209ENST00000509659 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
SPP1-209ENST00000509659 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
SPP1-209ENST00000509659 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
SPP1-209ENST00000509659 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
SPP1-209ENST00000509659 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
SPP1-209ENST00000509659 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
SPP1-209ENST00000509659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.192e-8■■□□□ 14.5
SPP1-209ENST00000509659 ZBTB22O15209 634 aa16.12■□□□□ 0.17
SPP1-209ENST00000509659 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
SPP1-209ENST00000509659 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
SPP1-209ENST00000509659 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
SPP1-209ENST00000509659 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
SPP1-209ENST00000509659 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
SPP1-209ENST00000509659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
SPP1-209ENST00000509659 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
SPP1-209ENST00000509659 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
SPP1-209ENST00000509659 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
SPP1-209ENST00000509659 APLP2Q06481 763 aa15.57■□□□□ 0.08
SPP1-209ENST00000509659 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
SPP1-209ENST00000509659 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
SPP1-209ENST00000509659 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
SPP1-209ENST00000509659 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
SPP1-209ENST00000509659 CAPN15O75808 1086 aa15.47■□□□□ 0.07
SPP1-209ENST00000509659 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
SPP1-209ENST00000509659 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
SPP1-209ENST00000509659 ABCB7O75027 752 aa15.19■□□□□ 0.02
SPP1-209ENST00000509659 DSG3P32926 999 aa15.18■□□□□ 0.02
SPP1-209ENST00000509659 POLA2Q14181 598 aa15.14■□□□□ 0.01
SPP1-209ENST00000509659 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
SPP1-209ENST00000509659 FBLN2P98095 1184 aa14.83□□□□□ -0.04
SPP1-209ENST00000509659 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
SPP1-209ENST00000509659 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
SPP1-209ENST00000509659 FKBP8Q14318 412 aa14.53□□□□□ -0.08
SPP1-209ENST00000509659 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
SPP1-209ENST00000509659 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
SPP1-209ENST00000509659 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
SPP1-209ENST00000509659 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
SPP1-209ENST00000509659 NISCHQ9Y2I1 1504 aa14.46□□□□□ -0.09
SPP1-209ENST00000509659 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
SPP1-209ENST00000509659 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
SPP1-209ENST00000509659 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.11
SPP1-209ENST00000509659 AKT1S1Q96B36 256 aa14.27□□□□□ -0.12
SPP1-209ENST00000509659 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
SPP1-209ENST00000509659 PROM2Q8N271 834 aa14.19□□□□□ -0.14
SPP1-209ENST00000509659 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
SPP1-209ENST00000509659 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
SPP1-209ENST00000509659 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
SPP1-209ENST00000509659 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
SPP1-209ENST00000509659 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
SPP1-209ENST00000509659 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
SPP1-209ENST00000509659 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
SPP1-209ENST00000509659 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
SPP1-209ENST00000509659 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
SPP1-209ENST00000509659 MIER1Q8N108 512 aa13.76□□□□□ -0.21
SPP1-209ENST00000509659 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
SPP1-209ENST00000509659 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.215e-6■■■□□ 14.9
SPP1-209ENST00000509659 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
SPP1-209ENST00000509659 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
SPP1-209ENST00000509659 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
SPP1-209ENST00000509659 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
SPP1-209ENST00000509659 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
SPP1-209ENST00000509659 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
SPP1-209ENST00000509659 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
SPP1-209ENST00000509659 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
SPP1-209ENST00000509659 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
SPP1-209ENST00000509659 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
SPP1-209ENST00000509659 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPP1-209ENST00000509659 SPOCK2Q92563 424 aa13.46□□□□□ -0.26
SPP1-209ENST00000509659 POTEHQ6S545 545 aa13.41□□□□□ -0.26
SPP1-209ENST00000509659 NUBP1P53384 320 aa13.37□□□□□ -0.27
SPP1-209ENST00000509659 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
SPP1-209ENST00000509659 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
SPP1-209ENST00000509659 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
SPP1-209ENST00000509659 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
SPP1-209ENST00000509659 HAX1O00165 279 aa13.28□□□□□ -0.28
SPP1-209ENST00000509659 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
SPP1-209ENST00000509659 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
SPP1-209ENST00000509659 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
SPP1-209ENST00000509659 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
SPP1-209ENST00000509659 GSE1Q14687 1217 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms