RNA–Protein interactions for RNA: ENST00000247461.8

CANX-201, Transcript of calnexin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CANX, Length 4,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-201ENST00000247461 NISCHQ9Y2I1 1504 aa28.88■■■□□ 2.21
CANX-201ENST00000247461 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
CANX-201ENST00000247461 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
CANX-201ENST00000247461 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
CANX-201ENST00000247461 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
CANX-201ENST00000247461 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
CANX-201ENST00000247461 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
CANX-201ENST00000247461 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
CANX-201ENST00000247461 ABCC9O60706 1549 aa24.96■■□□□ 1.59
CANX-201ENST00000247461 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
CANX-201ENST00000247461 RANGAP1P46060 587 aaPredicted RBP24.86■■□□□ 1.57
CANX-201ENST00000247461 APLP2Q06481 763 aa24.7■■□□□ 1.54
CANX-201ENST00000247461 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
CANX-201ENST00000247461 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
CANX-201ENST00000247461 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
CANX-201ENST00000247461 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
CANX-201ENST00000247461 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
CANX-201ENST00000247461 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
CANX-201ENST00000247461 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
CANX-201ENST00000247461 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
CANX-201ENST00000247461 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
CANX-201ENST00000247461 HRCP23327 699 aa23.98■■□□□ 1.43
CANX-201ENST00000247461 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
CANX-201ENST00000247461 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
CANX-201ENST00000247461 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
CANX-201ENST00000247461 ITGAEP38570 1179 aa23.65■■□□□ 1.38
CANX-201ENST00000247461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
CANX-201ENST00000247461 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
CANX-201ENST00000247461 CENPBP07199 599 aaPredicted RBP23.58■■□□□ 1.37
CANX-201ENST00000247461 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
CANX-201ENST00000247461 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
CANX-201ENST00000247461 FBLN2P98095 1184 aa23.27■■□□□ 1.32
CANX-201ENST00000247461 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
CANX-201ENST00000247461 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
CANX-201ENST00000247461 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
CANX-201ENST00000247461 P3H3Q8IVL6 736 aa23.15■■□□□ 1.3
CANX-201ENST00000247461 MYO15BQ96JP2 1530 aa23.09■■□□□ 1.29
CANX-201ENST00000247461 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
CANX-201ENST00000247461 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
CANX-201ENST00000247461 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
CANX-201ENST00000247461 NACADO15069 1562 aa23.02■■□□□ 1.28
CANX-201ENST00000247461 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
CANX-201ENST00000247461 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
CANX-201ENST00000247461 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
CANX-201ENST00000247461 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
CANX-201ENST00000247461 NEFLP07196 543 aa22.85■■□□□ 1.25
CANX-201ENST00000247461 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
CANX-201ENST00000247461 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
CANX-201ENST00000247461 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
CANX-201ENST00000247461 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
CANX-201ENST00000247461 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
CANX-201ENST00000247461 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CANX-201ENST00000247461 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
CANX-201ENST00000247461 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
CANX-201ENST00000247461 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
CANX-201ENST00000247461 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
CANX-201ENST00000247461 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
CANX-201ENST00000247461 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
CANX-201ENST00000247461 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
CANX-201ENST00000247461 CLIP1P30622 1438 aa22.42■■□□□ 1.18
CANX-201ENST00000247461 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
CANX-201ENST00000247461 CDK11AQ9UQ88 783 aaPredicted RBP22.38■■□□□ 1.17
CANX-201ENST00000247461 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
CANX-201ENST00000247461 EEA1Q15075 1411 aa22.32■■□□□ 1.16
CANX-201ENST00000247461 CHIC2Q9UKJ5 165 aa22.3■■□□□ 1.16
CANX-201ENST00000247461 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
CANX-201ENST00000247461 ACIN1Q9UKV3 1341 aaKnown RBP22.26■■□□□ 1.15
CANX-201ENST00000247461 SOGA1O94964 1423 aa22.25■■□□□ 1.15
CANX-201ENST00000247461 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
CANX-201ENST00000247461 ANP32CO43423 234 aa22.25■■□□□ 1.15
CANX-201ENST00000247461 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
CANX-201ENST00000247461 BCANQ96GW7 911 aa22.2■■□□□ 1.14
CANX-201ENST00000247461 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
CANX-201ENST00000247461 MTUS2Q5JR59 1369 aa22.16■■□□□ 1.14
CANX-201ENST00000247461 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.14
CANX-201ENST00000247461 WIZO95785 1651 aa22.13■■□□□ 1.13
CANX-201ENST00000247461 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
CANX-201ENST00000247461 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
CANX-201ENST00000247461 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
CANX-201ENST00000247461 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.12
CANX-201ENST00000247461 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
CANX-201ENST00000247461 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
CANX-201ENST00000247461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.124e-9■■□□□ 12.9
CANX-201ENST00000247461 CUX2O14529 1486 aa22.03■■□□□ 1.12
CANX-201ENST00000247461 MIER1Q8N108 512 aa22■■□□□ 1.11
CANX-201ENST00000247461 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
CANX-201ENST00000247461 SMARCA2P51531 1590 aa22■■□□□ 1.11
CANX-201ENST00000247461 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
CANX-201ENST00000247461 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
CANX-201ENST00000247461 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
CANX-201ENST00000247461 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
CANX-201ENST00000247461 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
CANX-201ENST00000247461 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
CANX-201ENST00000247461 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
CANX-201ENST00000247461 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
CANX-201ENST00000247461 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
CANX-201ENST00000247461 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
CANX-201ENST00000247461 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
CANX-201ENST00000247461 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
CANX-201ENST00000247461 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms