RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
DDX39B-207ENST00000427214 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
DDX39B-207ENST00000427214 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
DDX39B-207ENST00000427214 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
DDX39B-207ENST00000427214 FOXD1Q16676 465 aa17.08■□□□□ 0.32
DDX39B-207ENST00000427214 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
DDX39B-207ENST00000427214 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
DDX39B-207ENST00000427214 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
DDX39B-207ENST00000427214 ADRA2BP18089 450 aa15.99■□□□□ 0.15
DDX39B-207ENST00000427214 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
DDX39B-207ENST00000427214 MSH5O43196 834 aa15.95■□□□□ 0.14
DDX39B-207ENST00000427214 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
DDX39B-207ENST00000427214 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
DDX39B-207ENST00000427214 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
DDX39B-207ENST00000427214 SCAF1Q9H7N4 1312 aaKnown RBP14.63□□□□□ -0.07
DDX39B-207ENST00000427214 ABCC9O60706 1549 aa14.6□□□□□ -0.07
DDX39B-207ENST00000427214 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
DDX39B-207ENST00000427214 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
DDX39B-207ENST00000427214 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
DDX39B-207ENST00000427214 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
DDX39B-207ENST00000427214 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
DDX39B-207ENST00000427214 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
DDX39B-207ENST00000427214 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
DDX39B-207ENST00000427214 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
DDX39B-207ENST00000427214 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
DDX39B-207ENST00000427214 NACADO15069 1562 aa13.86□□□□□ -0.19
DDX39B-207ENST00000427214 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
DDX39B-207ENST00000427214 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
DDX39B-207ENST00000427214 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
DDX39B-207ENST00000427214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX39B-207ENST00000427214 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
DDX39B-207ENST00000427214 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
DDX39B-207ENST00000427214 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
DDX39B-207ENST00000427214 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
DDX39B-207ENST00000427214 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
DDX39B-207ENST00000427214 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
DDX39B-207ENST00000427214 KCNA4P22459 653 aa13.48□□□□□ -0.25
DDX39B-207ENST00000427214 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
DDX39B-207ENST00000427214 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
DDX39B-207ENST00000427214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.271e-15■□□□□ 10.6
DDX39B-207ENST00000427214 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
DDX39B-207ENST00000427214 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
DDX39B-207ENST00000427214 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
DDX39B-207ENST00000427214 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
DDX39B-207ENST00000427214 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-207ENST00000427214 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
DDX39B-207ENST00000427214 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-207ENST00000427214 CAPN15O75808 1086 aa12.87□□□□□ -0.35
DDX39B-207ENST00000427214 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
DDX39B-207ENST00000427214 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
DDX39B-207ENST00000427214 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
DDX39B-207ENST00000427214 DSG3P32926 999 aa12.78□□□□□ -0.36
DDX39B-207ENST00000427214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-207ENST00000427214 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
DDX39B-207ENST00000427214 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-207ENST00000427214 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
DDX39B-207ENST00000427214 APLP2Q06481 763 aa12.75□□□□□ -0.37
DDX39B-207ENST00000427214 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
DDX39B-207ENST00000427214 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
DDX39B-207ENST00000427214 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
DDX39B-207ENST00000427214 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-207ENST00000427214 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
DDX39B-207ENST00000427214 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
DDX39B-207ENST00000427214 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-207ENST00000427214 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-207ENST00000427214 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-207ENST00000427214 NESP48681 1621 aa12.59□□□□□ -0.39
DDX39B-207ENST00000427214 ABCB7O75027 752 aa12.57□□□□□ -0.4
DDX39B-207ENST00000427214 WIZO95785 1651 aa12.57□□□□□ -0.4
DDX39B-207ENST00000427214 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
DDX39B-207ENST00000427214 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
DDX39B-207ENST00000427214 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-207ENST00000427214 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
DDX39B-207ENST00000427214 CUX2O14529 1486 aa12.47□□□□□ -0.41
DDX39B-207ENST00000427214 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
DDX39B-207ENST00000427214 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
DDX39B-207ENST00000427214 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
DDX39B-207ENST00000427214 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
DDX39B-207ENST00000427214 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
DDX39B-207ENST00000427214 ZBTB22O15209 634 aa12.39□□□□□ -0.43
DDX39B-207ENST00000427214 POLA2Q14181 598 aa12.37□□□□□ -0.43
DDX39B-207ENST00000427214 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-207ENST00000427214 CFTRP13569 1480 aa12.34□□□□□ -0.43
DDX39B-207ENST00000427214 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
DDX39B-207ENST00000427214 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
DDX39B-207ENST00000427214 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
DDX39B-207ENST00000427214 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
DDX39B-207ENST00000427214 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
DDX39B-207ENST00000427214 WDR62O43379 1518 aa12.27□□□□□ -0.45
DDX39B-207ENST00000427214 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
DDX39B-207ENST00000427214 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
DDX39B-207ENST00000427214 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
DDX39B-207ENST00000427214 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
DDX39B-207ENST00000427214 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-207ENST00000427214 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
DDX39B-207ENST00000427214 POTEHQ6S545 545 aa12.1□□□□□ -0.47
DDX39B-207ENST00000427214 TOPBP1Q92547 1522 aa12.08□□□□□ -0.48
DDX39B-207ENST00000427214 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
DDX39B-207ENST00000427214 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
DDX39B-207ENST00000427214 ZNF608Q9ULD9 1512 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms