RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-213ENST00000622963 AEBP2Q6ZN18 517 aaPredicted RBP34.35■■■■□ 3.09
SNHG5-213ENST00000622963 CHIC1Q5VXU3 224 aa32.37■■■□□ 2.77
SNHG5-213ENST00000622963 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
SNHG5-213ENST00000622963 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
SNHG5-213ENST00000622963 PHF23Q9BUL5 403 aaPredicted RBP28.98■■■□□ 2.23
SNHG5-213ENST00000622963 ABCC9O60706 1549 aa27.88■■■□□ 2.05
SNHG5-213ENST00000622963 FOXD1Q16676 465 aa27.43■■□□□ 1.98
SNHG5-213ENST00000622963 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
SNHG5-213ENST00000622963 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
SNHG5-213ENST00000622963 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
SNHG5-213ENST00000622963 NACADO15069 1562 aa25.9■■□□□ 1.74
SNHG5-213ENST00000622963 MSH5O43196 834 aa25.9■■□□□ 1.74
SNHG5-213ENST00000622963 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
SNHG5-213ENST00000622963 POTEDQ86YR6 584 aa25.77■■□□□ 1.72
SNHG5-213ENST00000622963 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
SNHG5-213ENST00000622963 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
SNHG5-213ENST00000622963 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
SNHG5-213ENST00000622963 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
SNHG5-213ENST00000622963 PIAS4Q8N2W9 510 aaPredicted RBP25.57■■□□□ 1.68
SNHG5-213ENST00000622963 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
SNHG5-213ENST00000622963 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
SNHG5-213ENST00000622963 ADRA2BP18089 450 aa25.23■■□□□ 1.63
SNHG5-213ENST00000622963 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
SNHG5-213ENST00000622963 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SNHG5-213ENST00000622963 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
SNHG5-213ENST00000622963 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
SNHG5-213ENST00000622963 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
SNHG5-213ENST00000622963 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
SNHG5-213ENST00000622963 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
SNHG5-213ENST00000622963 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
SNHG5-213ENST00000622963 CUX2O14529 1486 aa24.15■■□□□ 1.46
SNHG5-213ENST00000622963 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
SNHG5-213ENST00000622963 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
SNHG5-213ENST00000622963 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
SNHG5-213ENST00000622963 NESP48681 1621 aa23.85■■□□□ 1.41
SNHG5-213ENST00000622963 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
SNHG5-213ENST00000622963 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SNHG5-213ENST00000622963 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
SNHG5-213ENST00000622963 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
SNHG5-213ENST00000622963 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
SNHG5-213ENST00000622963 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
SNHG5-213ENST00000622963 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
SNHG5-213ENST00000622963 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
SNHG5-213ENST00000622963 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
SNHG5-213ENST00000622963 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
SNHG5-213ENST00000622963 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
SNHG5-213ENST00000622963 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.32
SNHG5-213ENST00000622963 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
SNHG5-213ENST00000622963 MAPK8IP2Q13387 824 aaPredicted RBP23.27■■□□□ 1.32
SNHG5-213ENST00000622963 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
SNHG5-213ENST00000622963 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
SNHG5-213ENST00000622963 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
SNHG5-213ENST00000622963 WDR62O43379 1518 aa23.2■■□□□ 1.3
SNHG5-213ENST00000622963 WIZO95785 1651 aa23.02■■□□□ 1.28
SNHG5-213ENST00000622963 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
SNHG5-213ENST00000622963 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
SNHG5-213ENST00000622963 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
SNHG5-213ENST00000622963 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
SNHG5-213ENST00000622963 CFTRP13569 1480 aa22.86■■□□□ 1.25
SNHG5-213ENST00000622963 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
SNHG5-213ENST00000622963 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
SNHG5-213ENST00000622963 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
SNHG5-213ENST00000622963 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
SNHG5-213ENST00000622963 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
SNHG5-213ENST00000622963 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
SNHG5-213ENST00000622963 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
SNHG5-213ENST00000622963 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
SNHG5-213ENST00000622963 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
SNHG5-213ENST00000622963 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
SNHG5-213ENST00000622963 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
SNHG5-213ENST00000622963 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
SNHG5-213ENST00000622963 PPP4R3CPQ6ZMV5 832 aa22.47■■□□□ 1.19
SNHG5-213ENST00000622963 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
SNHG5-213ENST00000622963 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
SNHG5-213ENST00000622963 CHD1O14646 1710 aa22.38■■□□□ 1.17
SNHG5-213ENST00000622963 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.173e-11■■■■□ 23
SNHG5-213ENST00000622963 CACNB1Q02641 598 aaPredicted RBP22.37■■□□□ 1.17
SNHG5-213ENST00000622963 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
SNHG5-213ENST00000622963 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
SNHG5-213ENST00000622963 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
SNHG5-213ENST00000622963 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
SNHG5-213ENST00000622963 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
SNHG5-213ENST00000622963 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
SNHG5-213ENST00000622963 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SNHG5-213ENST00000622963 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
SNHG5-213ENST00000622963 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
SNHG5-213ENST00000622963 CNKSR2Q8WXI2 1034 aa22.17■■□□□ 1.14
SNHG5-213ENST00000622963 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
SNHG5-213ENST00000622963 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
SNHG5-213ENST00000622963 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
SNHG5-213ENST00000622963 SOGA1O94964 1423 aa22.08■■□□□ 1.13
SNHG5-213ENST00000622963 RNF216Q9NWF9 866 aaPredicted RBP22.07■■□□□ 1.12
SNHG5-213ENST00000622963 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
SNHG5-213ENST00000622963 RNF39Q9H2S5 420 aa22.02■■□□□ 1.12
SNHG5-213ENST00000622963 SYNJ1O43426 1573 aa22■■□□□ 1.11
SNHG5-213ENST00000622963 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
SNHG5-213ENST00000622963 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
SNHG5-213ENST00000622963 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
SNHG5-213ENST00000622963 CUX1P39880 1505 aa21.96■■□□□ 1.11
SNHG5-213ENST00000622963 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms