RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
RPL4-202ENST00000561554 ABCC9O60706 1549 aa25.42■■□□□ 1.66
RPL4-202ENST00000561554 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
RPL4-202ENST00000561554 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
RPL4-202ENST00000561554 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
RPL4-202ENST00000561554 NACADO15069 1562 aa23.91■■□□□ 1.42
RPL4-202ENST00000561554 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.37
RPL4-202ENST00000561554 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
RPL4-202ENST00000561554 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
RPL4-202ENST00000561554 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
RPL4-202ENST00000561554 BICRAQ9NZM4 1560 aa23.42■■□□□ 1.34
RPL4-202ENST00000561554 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
RPL4-202ENST00000561554 DCAF1Q9Y4B6 1507 aa23.05■■□□□ 1.28
RPL4-202ENST00000561554 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
RPL4-202ENST00000561554 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
RPL4-202ENST00000561554 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
RPL4-202ENST00000561554 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
RPL4-202ENST00000561554 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
RPL4-202ENST00000561554 DNAJC5Q9H3Z4 198 aa22.6■■□□□ 1.21
RPL4-202ENST00000561554 CUX2O14529 1486 aa22.21■■□□□ 1.15
RPL4-202ENST00000561554 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
RPL4-202ENST00000561554 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
RPL4-202ENST00000561554 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
RPL4-202ENST00000561554 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
RPL4-202ENST00000561554 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
RPL4-202ENST00000561554 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
RPL4-202ENST00000561554 NESP48681 1621 aa21.73■■□□□ 1.07
RPL4-202ENST00000561554 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
RPL4-202ENST00000561554 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
RPL4-202ENST00000561554 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
RPL4-202ENST00000561554 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
RPL4-202ENST00000561554 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
RPL4-202ENST00000561554 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
RPL4-202ENST00000561554 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
RPL4-202ENST00000561554 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
RPL4-202ENST00000561554 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
RPL4-202ENST00000561554 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
RPL4-202ENST00000561554 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
RPL4-202ENST00000561554 WDR62O43379 1518 aa21.31■■□□□ 1
RPL4-202ENST00000561554 TRIM41Q8WV44 630 aa21.31■■□□□ 1
RPL4-202ENST00000561554 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
RPL4-202ENST00000561554 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
RPL4-202ENST00000561554 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
RPL4-202ENST00000561554 WIZO95785 1651 aa21.09■□□□□ 0.97
RPL4-202ENST00000561554 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
RPL4-202ENST00000561554 CFTRP13569 1480 aa21.05■□□□□ 0.96
RPL4-202ENST00000561554 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
RPL4-202ENST00000561554 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
RPL4-202ENST00000561554 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
RPL4-202ENST00000561554 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
RPL4-202ENST00000561554 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
RPL4-202ENST00000561554 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
RPL4-202ENST00000561554 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
RPL4-202ENST00000561554 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
RPL4-202ENST00000561554 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RPL4-202ENST00000561554 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
RPL4-202ENST00000561554 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
RPL4-202ENST00000561554 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
RPL4-202ENST00000561554 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
RPL4-202ENST00000561554 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
RPL4-202ENST00000561554 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
RPL4-202ENST00000561554 CYB5RLQ6IPT4 315 aa20.55■□□□□ 0.88
RPL4-202ENST00000561554 CHD1O14646 1710 aa20.5■□□□□ 0.87
RPL4-202ENST00000561554 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
RPL4-202ENST00000561554 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
RPL4-202ENST00000561554 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.873e-11■■■■■ 40.7
RPL4-202ENST00000561554 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
RPL4-202ENST00000561554 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
RPL4-202ENST00000561554 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
RPL4-202ENST00000561554 FBLN2P98095 1184 aa20.36■□□□□ 0.85
RPL4-202ENST00000561554 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
RPL4-202ENST00000561554 SOGA1O94964 1423 aa20.3■□□□□ 0.84
RPL4-202ENST00000561554 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
RPL4-202ENST00000561554 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
RPL4-202ENST00000561554 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
RPL4-202ENST00000561554 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
RPL4-202ENST00000561554 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
RPL4-202ENST00000561554 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
RPL4-202ENST00000561554 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
RPL4-202ENST00000561554 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
RPL4-202ENST00000561554 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
RPL4-202ENST00000561554 CUX1P39880 1505 aa20.12■□□□□ 0.81
RPL4-202ENST00000561554 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
RPL4-202ENST00000561554 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
RPL4-202ENST00000561554 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
RPL4-202ENST00000561554 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
RPL4-202ENST00000561554 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
RPL4-202ENST00000561554 NUP160Q12769 1436 aa19.91■□□□□ 0.78
RPL4-202ENST00000561554 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
RPL4-202ENST00000561554 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
RPL4-202ENST00000561554 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
RPL4-202ENST00000561554 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
RPL4-202ENST00000561554 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
RPL4-202ENST00000561554 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
RPL4-202ENST00000561554 KIF13AQ9H1H9 1805 aa19.77■□□□□ 0.76
RPL4-202ENST00000561554 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
RPL4-202ENST00000561554 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
RPL4-202ENST00000561554 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
RPL4-202ENST00000561554 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
RPL4-202ENST00000561554 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms