RNA–Protein interactions for RNA: ENST00000431908.5

DDX39B-210, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-210ENST00000431908 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
DDX39B-210ENST00000431908 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
DDX39B-210ENST00000431908 ABCC9O60706 1549 aa26.49■■□□□ 1.83
DDX39B-210ENST00000431908 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
DDX39B-210ENST00000431908 NACADO15069 1562 aa25.08■■□□□ 1.61
DDX39B-210ENST00000431908 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
DDX39B-210ENST00000431908 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
DDX39B-210ENST00000431908 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
DDX39B-210ENST00000431908 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
DDX39B-210ENST00000431908 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.545e-19■□□□□ 10.7
DDX39B-210ENST00000431908 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
DDX39B-210ENST00000431908 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
DDX39B-210ENST00000431908 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
DDX39B-210ENST00000431908 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
DDX39B-210ENST00000431908 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
DDX39B-210ENST00000431908 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
DDX39B-210ENST00000431908 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
DDX39B-210ENST00000431908 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
DDX39B-210ENST00000431908 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
DDX39B-210ENST00000431908 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
DDX39B-210ENST00000431908 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
DDX39B-210ENST00000431908 ATAD2BQ9ULI0 1458 aa23.01■■□□□ 1.27
DDX39B-210ENST00000431908 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
DDX39B-210ENST00000431908 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
DDX39B-210ENST00000431908 BAZ1AQ9NRL2 1556 aaPredicted RBP22.94■■□□□ 1.26
DDX39B-210ENST00000431908 CUX2O14529 1486 aa22.87■■□□□ 1.25
DDX39B-210ENST00000431908 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
DDX39B-210ENST00000431908 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
DDX39B-210ENST00000431908 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
DDX39B-210ENST00000431908 NESP48681 1621 aa22.71■■□□□ 1.23
DDX39B-210ENST00000431908 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
DDX39B-210ENST00000431908 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
DDX39B-210ENST00000431908 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
DDX39B-210ENST00000431908 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
DDX39B-210ENST00000431908 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
DDX39B-210ENST00000431908 WIZO95785 1651 aa22.47■■□□□ 1.19
DDX39B-210ENST00000431908 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
DDX39B-210ENST00000431908 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
DDX39B-210ENST00000431908 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
DDX39B-210ENST00000431908 WDR62O43379 1518 aa22.21■■□□□ 1.15
DDX39B-210ENST00000431908 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
DDX39B-210ENST00000431908 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
DDX39B-210ENST00000431908 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
DDX39B-210ENST00000431908 CFTRP13569 1480 aa22.14■■□□□ 1.13
DDX39B-210ENST00000431908 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
DDX39B-210ENST00000431908 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
DDX39B-210ENST00000431908 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
DDX39B-210ENST00000431908 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
DDX39B-210ENST00000431908 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
DDX39B-210ENST00000431908 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
DDX39B-210ENST00000431908 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
DDX39B-210ENST00000431908 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
DDX39B-210ENST00000431908 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
DDX39B-210ENST00000431908 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
DDX39B-210ENST00000431908 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
DDX39B-210ENST00000431908 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
DDX39B-210ENST00000431908 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
DDX39B-210ENST00000431908 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
DDX39B-210ENST00000431908 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
DDX39B-210ENST00000431908 CHD1O14646 1710 aa21.5■■□□□ 1.03
DDX39B-210ENST00000431908 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.031e-7■■■■□ 24.6
DDX39B-210ENST00000431908 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
DDX39B-210ENST00000431908 FBLN2P98095 1184 aa21.48■■□□□ 1.03
DDX39B-210ENST00000431908 SOGA1O94964 1423 aa21.46■■□□□ 1.03
DDX39B-210ENST00000431908 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
DDX39B-210ENST00000431908 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
DDX39B-210ENST00000431908 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
DDX39B-210ENST00000431908 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
DDX39B-210ENST00000431908 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
DDX39B-210ENST00000431908 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
DDX39B-210ENST00000431908 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
DDX39B-210ENST00000431908 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
DDX39B-210ENST00000431908 CUX1P39880 1505 aa21.32■■□□□ 1
DDX39B-210ENST00000431908 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
DDX39B-210ENST00000431908 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
DDX39B-210ENST00000431908 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
DDX39B-210ENST00000431908 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
DDX39B-210ENST00000431908 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
DDX39B-210ENST00000431908 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
DDX39B-210ENST00000431908 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
DDX39B-210ENST00000431908 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
DDX39B-210ENST00000431908 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
DDX39B-210ENST00000431908 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
DDX39B-210ENST00000431908 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
DDX39B-210ENST00000431908 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
DDX39B-210ENST00000431908 WRNQ14191 1432 aaPredicted RBP eCLIP21.1■□□□□ 0.97
DDX39B-210ENST00000431908 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
DDX39B-210ENST00000431908 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
DDX39B-210ENST00000431908 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
DDX39B-210ENST00000431908 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
DDX39B-210ENST00000431908 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
DDX39B-210ENST00000431908 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
DDX39B-210ENST00000431908 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
DDX39B-210ENST00000431908 NUP160Q12769 1436 aa20.86■□□□□ 0.93
DDX39B-210ENST00000431908 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
DDX39B-210ENST00000431908 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
DDX39B-210ENST00000431908 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
DDX39B-210ENST00000431908 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
DDX39B-210ENST00000431908 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
DDX39B-210ENST00000431908 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms