RNA–Protein interactions for RNA: ENST00000624128.1

SNHG5-220, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 2

Gene SNHG5, Length 672 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-220ENST00000624128 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
SNHG5-220ENST00000624128 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
SNHG5-220ENST00000624128 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
SNHG5-220ENST00000624128 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
SNHG5-220ENST00000624128 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
SNHG5-220ENST00000624128 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
SNHG5-220ENST00000624128 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
SNHG5-220ENST00000624128 ABCC9O60706 1549 aa17.57■□□□□ 0.4
SNHG5-220ENST00000624128 ADRA2BP18089 450 aa17.4■□□□□ 0.38
SNHG5-220ENST00000624128 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
SNHG5-220ENST00000624128 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
SNHG5-220ENST00000624128 KCNA4P22459 653 aa17.32■□□□□ 0.36
SNHG5-220ENST00000624128 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
SNHG5-220ENST00000624128 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
SNHG5-220ENST00000624128 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
SNHG5-220ENST00000624128 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
SNHG5-220ENST00000624128 NACADO15069 1562 aa17.09■□□□□ 0.33
SNHG5-220ENST00000624128 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
SNHG5-220ENST00000624128 FOXD1Q16676 465 aa17■□□□□ 0.31
SNHG5-220ENST00000624128 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
SNHG5-220ENST00000624128 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
SNHG5-220ENST00000624128 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
SNHG5-220ENST00000624128 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
SNHG5-220ENST00000624128 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
SNHG5-220ENST00000624128 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
SNHG5-220ENST00000624128 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNHG5-220ENST00000624128 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
SNHG5-220ENST00000624128 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
SNHG5-220ENST00000624128 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
SNHG5-220ENST00000624128 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
SNHG5-220ENST00000624128 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
SNHG5-220ENST00000624128 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
SNHG5-220ENST00000624128 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
SNHG5-220ENST00000624128 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
SNHG5-220ENST00000624128 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
SNHG5-220ENST00000624128 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
SNHG5-220ENST00000624128 ZBTB22O15209 634 aa15.93■□□□□ 0.14
SNHG5-220ENST00000624128 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
SNHG5-220ENST00000624128 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
SNHG5-220ENST00000624128 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
SNHG5-220ENST00000624128 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
SNHG5-220ENST00000624128 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
SNHG5-220ENST00000624128 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
SNHG5-220ENST00000624128 WIZO95785 1651 aa15.82■□□□□ 0.12
SNHG5-220ENST00000624128 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
SNHG5-220ENST00000624128 SMARCA2P51531 1590 aa15.81■□□□□ 0.12
SNHG5-220ENST00000624128 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
SNHG5-220ENST00000624128 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.1
SNHG5-220ENST00000624128 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
SNHG5-220ENST00000624128 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
SNHG5-220ENST00000624128 SLC24A1O60721 1099 aa15.66■□□□□ 0.1
SNHG5-220ENST00000624128 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
SNHG5-220ENST00000624128 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
SNHG5-220ENST00000624128 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
SNHG5-220ENST00000624128 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
SNHG5-220ENST00000624128 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
SNHG5-220ENST00000624128 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
SNHG5-220ENST00000624128 CFTRP13569 1480 aa15.33■□□□□ 0.05
SNHG5-220ENST00000624128 MSH5O43196 834 aa15.33■□□□□ 0.04
SNHG5-220ENST00000624128 NESP48681 1621 aa15.31■□□□□ 0.04
SNHG5-220ENST00000624128 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
SNHG5-220ENST00000624128 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
SNHG5-220ENST00000624128 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
SNHG5-220ENST00000624128 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
SNHG5-220ENST00000624128 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
SNHG5-220ENST00000624128 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
SNHG5-220ENST00000624128 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
SNHG5-220ENST00000624128 ERCC6Q03468 1493 aa15.08■□□□□ 0
SNHG5-220ENST00000624128 KIF21AQ7Z4S6 1674 aa15.07■□□□□ 0
SNHG5-220ENST00000624128 FKBP8Q14318 412 aa15.04■□□□□ -0
SNHG5-220ENST00000624128 SLC4A2P04920 1241 aa15.03■□□□□ -0
SNHG5-220ENST00000624128 HOXD11P31277 338 aaPredicted RBP15.02■□□□□ -0
SNHG5-220ENST00000624128 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
SNHG5-220ENST00000624128 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
SNHG5-220ENST00000624128 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
SNHG5-220ENST00000624128 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
SNHG5-220ENST00000624128 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
SNHG5-220ENST00000624128 CUX1P39880 1505 aa14.97□□□□□ -0.01
SNHG5-220ENST00000624128 TOPBP1Q92547 1522 aa14.96□□□□□ -0.02
SNHG5-220ENST00000624128 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
SNHG5-220ENST00000624128 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
SNHG5-220ENST00000624128 WDR62O43379 1518 aa14.93□□□□□ -0.02
SNHG5-220ENST00000624128 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
SNHG5-220ENST00000624128 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
SNHG5-220ENST00000624128 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
SNHG5-220ENST00000624128 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
SNHG5-220ENST00000624128 BIVM-ERCC5R4GMW8 1640 aa14.89□□□□□ -0.03
SNHG5-220ENST00000624128 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
SNHG5-220ENST00000624128 FGD5Q6ZNL6 1462 aa14.86□□□□□ -0.03
SNHG5-220ENST00000624128 SOGA1O94964 1423 aa14.83□□□□□ -0.03
SNHG5-220ENST00000624128 CUX2O14529 1486 aa14.83□□□□□ -0.03
SNHG5-220ENST00000624128 RAD54L2Q9Y4B4 1467 aa14.81□□□□□ -0.04
SNHG5-220ENST00000624128 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
SNHG5-220ENST00000624128 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
SNHG5-220ENST00000624128 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
SNHG5-220ENST00000624128 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
SNHG5-220ENST00000624128 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
SNHG5-220ENST00000624128 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
SNHG5-220ENST00000624128 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.063e-11■■■■□ 23
SNHG5-220ENST00000624128 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms