RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
RPS3-214ENST00000530164 ABCC9O60706 1549 aa20.26■□□□□ 0.83
RPS3-214ENST00000530164 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
RPS3-214ENST00000530164 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.69
RPS3-214ENST00000530164 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
RPS3-214ENST00000530164 NACADO15069 1562 aa18.96■□□□□ 0.63
RPS3-214ENST00000530164 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
RPS3-214ENST00000530164 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
RPS3-214ENST00000530164 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
RPS3-214ENST00000530164 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
RPS3-214ENST00000530164 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.57
RPS3-214ENST00000530164 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
RPS3-214ENST00000530164 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
RPS3-214ENST00000530164 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
RPS3-214ENST00000530164 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
RPS3-214ENST00000530164 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
RPS3-214ENST00000530164 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
RPS3-214ENST00000530164 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
RPS3-214ENST00000530164 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
RPS3-214ENST00000530164 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
RPS3-214ENST00000530164 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
RPS3-214ENST00000530164 CUX2O14529 1486 aa17.6■□□□□ 0.41
RPS3-214ENST00000530164 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
RPS3-214ENST00000530164 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
RPS3-214ENST00000530164 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
RPS3-214ENST00000530164 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
RPS3-214ENST00000530164 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
RPS3-214ENST00000530164 NESP48681 1621 aa17.32■□□□□ 0.36
RPS3-214ENST00000530164 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
RPS3-214ENST00000530164 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
RPS3-214ENST00000530164 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
RPS3-214ENST00000530164 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
RPS3-214ENST00000530164 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
RPS3-214ENST00000530164 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
RPS3-214ENST00000530164 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
RPS3-214ENST00000530164 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
RPS3-214ENST00000530164 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
RPS3-214ENST00000530164 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
RPS3-214ENST00000530164 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
RPS3-214ENST00000530164 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
RPS3-214ENST00000530164 WDR62O43379 1518 aa16.9■□□□□ 0.3
RPS3-214ENST00000530164 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
RPS3-214ENST00000530164 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
RPS3-214ENST00000530164 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
RPS3-214ENST00000530164 WIZO95785 1651 aa16.78■□□□□ 0.28
RPS3-214ENST00000530164 CFTRP13569 1480 aa16.73■□□□□ 0.27
RPS3-214ENST00000530164 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
RPS3-214ENST00000530164 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
RPS3-214ENST00000530164 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
RPS3-214ENST00000530164 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
RPS3-214ENST00000530164 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
RPS3-214ENST00000530164 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
RPS3-214ENST00000530164 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
RPS3-214ENST00000530164 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
RPS3-214ENST00000530164 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
RPS3-214ENST00000530164 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
RPS3-214ENST00000530164 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
RPS3-214ENST00000530164 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
RPS3-214ENST00000530164 PRDM2Q13029 1718 aa16.41■□□□□ 0.22
RPS3-214ENST00000530164 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
RPS3-214ENST00000530164 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
RPS3-214ENST00000530164 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
RPS3-214ENST00000530164 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.217e-8■■■■□ 20.2
RPS3-214ENST00000530164 FBLN2P98095 1184 aa16.32■□□□□ 0.2
RPS3-214ENST00000530164 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
RPS3-214ENST00000530164 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
RPS3-214ENST00000530164 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
RPS3-214ENST00000530164 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
RPS3-214ENST00000530164 CHD1O14646 1710 aa16.24■□□□□ 0.19
RPS3-214ENST00000530164 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
RPS3-214ENST00000530164 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
RPS3-214ENST00000530164 SOGA1O94964 1423 aa16.18■□□□□ 0.18
RPS3-214ENST00000530164 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
RPS3-214ENST00000530164 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
RPS3-214ENST00000530164 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
RPS3-214ENST00000530164 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
RPS3-214ENST00000530164 MAGI1Q96QZ7 1491 aaPredicted RBP16.09■□□□□ 0.17
RPS3-214ENST00000530164 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
RPS3-214ENST00000530164 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.17
RPS3-214ENST00000530164 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
RPS3-214ENST00000530164 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
RPS3-214ENST00000530164 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
RPS3-214ENST00000530164 CUX1P39880 1505 aa16.02■□□□□ 0.15
RPS3-214ENST00000530164 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
RPS3-214ENST00000530164 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
RPS3-214ENST00000530164 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
RPS3-214ENST00000530164 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
RPS3-214ENST00000530164 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
RPS3-214ENST00000530164 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
RPS3-214ENST00000530164 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
RPS3-214ENST00000530164 NUP160Q12769 1436 aa15.82■□□□□ 0.12
RPS3-214ENST00000530164 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
RPS3-214ENST00000530164 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
RPS3-214ENST00000530164 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
RPS3-214ENST00000530164 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
RPS3-214ENST00000530164 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
RPS3-214ENST00000530164 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
RPS3-214ENST00000530164 PRG4Q92954 1404 aaPredicted RBP15.7■□□□□ 0.1
RPS3-214ENST00000530164 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
RPS3-214ENST00000530164 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms