RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
DDX39B-201ENST00000376177 ABCC9O60706 1549 aa26.23■■□□□ 1.79
DDX39B-201ENST00000376177 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
DDX39B-201ENST00000376177 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
DDX39B-201ENST00000376177 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
DDX39B-201ENST00000376177 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.483e-19■■□□□ 11.8
DDX39B-201ENST00000376177 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
DDX39B-201ENST00000376177 NACADO15069 1562 aa24.26■■□□□ 1.47
DDX39B-201ENST00000376177 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
DDX39B-201ENST00000376177 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
DDX39B-201ENST00000376177 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
DDX39B-201ENST00000376177 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
DDX39B-201ENST00000376177 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
DDX39B-201ENST00000376177 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
DDX39B-201ENST00000376177 DNAJC5Q9H3Z4 198 aa23.41■■□□□ 1.34
DDX39B-201ENST00000376177 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
DDX39B-201ENST00000376177 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
DDX39B-201ENST00000376177 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
DDX39B-201ENST00000376177 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
DDX39B-201ENST00000376177 CUX2O14529 1486 aa22.71■■□□□ 1.23
DDX39B-201ENST00000376177 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
DDX39B-201ENST00000376177 NESP48681 1621 aa22.41■■□□□ 1.18
DDX39B-201ENST00000376177 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
DDX39B-201ENST00000376177 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
DDX39B-201ENST00000376177 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
DDX39B-201ENST00000376177 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
DDX39B-201ENST00000376177 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
DDX39B-201ENST00000376177 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
DDX39B-201ENST00000376177 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
DDX39B-201ENST00000376177 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
DDX39B-201ENST00000376177 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
DDX39B-201ENST00000376177 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
DDX39B-201ENST00000376177 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
DDX39B-201ENST00000376177 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
DDX39B-201ENST00000376177 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
DDX39B-201ENST00000376177 MROH2BQ7Z745 1585 aa21.81■■□□□ 1.08
DDX39B-201ENST00000376177 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
DDX39B-201ENST00000376177 WDR62O43379 1518 aa21.76■■□□□ 1.07
DDX39B-201ENST00000376177 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
DDX39B-201ENST00000376177 WIZO95785 1651 aa21.57■■□□□ 1.04
DDX39B-201ENST00000376177 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
DDX39B-201ENST00000376177 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
DDX39B-201ENST00000376177 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.03
DDX39B-201ENST00000376177 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.03
DDX39B-201ENST00000376177 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.03
DDX39B-201ENST00000376177 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
DDX39B-201ENST00000376177 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
DDX39B-201ENST00000376177 CFTRP13569 1480 aa21.35■■□□□ 1.01
DDX39B-201ENST00000376177 ARHGEF11O15085 1522 aa21.33■■□□□ 1
DDX39B-201ENST00000376177 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
DDX39B-201ENST00000376177 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
DDX39B-201ENST00000376177 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
DDX39B-201ENST00000376177 CHD1O14646 1710 aa21.14■□□□□ 0.97
DDX39B-201ENST00000376177 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
DDX39B-201ENST00000376177 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
DDX39B-201ENST00000376177 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
DDX39B-201ENST00000376177 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
DDX39B-201ENST00000376177 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
DDX39B-201ENST00000376177 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
DDX39B-201ENST00000376177 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
DDX39B-201ENST00000376177 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.953e-9■■■■□ 25.3
DDX39B-201ENST00000376177 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
DDX39B-201ENST00000376177 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
DDX39B-201ENST00000376177 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
DDX39B-201ENST00000376177 FBLN2P98095 1184 aa20.89■□□□□ 0.94
DDX39B-201ENST00000376177 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
DDX39B-201ENST00000376177 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
DDX39B-201ENST00000376177 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
DDX39B-201ENST00000376177 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
DDX39B-201ENST00000376177 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
DDX39B-201ENST00000376177 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
DDX39B-201ENST00000376177 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
DDX39B-201ENST00000376177 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
DDX39B-201ENST00000376177 SOGA1O94964 1423 aa20.64■□□□□ 0.89
DDX39B-201ENST00000376177 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
DDX39B-201ENST00000376177 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
DDX39B-201ENST00000376177 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
DDX39B-201ENST00000376177 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
DDX39B-201ENST00000376177 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
DDX39B-201ENST00000376177 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
DDX39B-201ENST00000376177 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
DDX39B-201ENST00000376177 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
DDX39B-201ENST00000376177 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
DDX39B-201ENST00000376177 CUX1P39880 1505 aa20.52■□□□□ 0.87
DDX39B-201ENST00000376177 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
DDX39B-201ENST00000376177 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
DDX39B-201ENST00000376177 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
DDX39B-201ENST00000376177 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
DDX39B-201ENST00000376177 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
DDX39B-201ENST00000376177 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
DDX39B-201ENST00000376177 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
DDX39B-201ENST00000376177 NUP160Q12769 1436 aa20.24■□□□□ 0.83
DDX39B-201ENST00000376177 KDM4FA0A1W2PPD8 638 aa20.13■□□□□ 0.81
DDX39B-201ENST00000376177 ILDR1Q86SU0 546 aaPredicted RBP20.13■□□□□ 0.81
DDX39B-201ENST00000376177 FAM69CQ0P6D2 419 aa20.09■□□□□ 0.81
DDX39B-201ENST00000376177 DIP2BQ9P265 1576 aa20.09■□□□□ 0.81
DDX39B-201ENST00000376177 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
DDX39B-201ENST00000376177 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
DDX39B-201ENST00000376177 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
DDX39B-201ENST00000376177 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms