RNA–Protein interactions for RNA: ENST00000431043.1

SNHG5-207, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 2

Gene SNHG5, Length 998 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-207ENST00000431043 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
SNHG5-207ENST00000431043 ABCC9O60706 1549 aa27.88■■■□□ 2.05
SNHG5-207ENST00000431043 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
SNHG5-207ENST00000431043 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
SNHG5-207ENST00000431043 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
SNHG5-207ENST00000431043 NACADO15069 1562 aa25.9■■□□□ 1.74
SNHG5-207ENST00000431043 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
SNHG5-207ENST00000431043 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
SNHG5-207ENST00000431043 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
SNHG5-207ENST00000431043 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
SNHG5-207ENST00000431043 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
SNHG5-207ENST00000431043 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
SNHG5-207ENST00000431043 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SNHG5-207ENST00000431043 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
SNHG5-207ENST00000431043 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
SNHG5-207ENST00000431043 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
SNHG5-207ENST00000431043 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
SNHG5-207ENST00000431043 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
SNHG5-207ENST00000431043 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
SNHG5-207ENST00000431043 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
SNHG5-207ENST00000431043 CUX2O14529 1486 aa24.15■■□□□ 1.46
SNHG5-207ENST00000431043 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
SNHG5-207ENST00000431043 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
SNHG5-207ENST00000431043 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
SNHG5-207ENST00000431043 NESP48681 1621 aa23.85■■□□□ 1.41
SNHG5-207ENST00000431043 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
SNHG5-207ENST00000431043 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SNHG5-207ENST00000431043 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
SNHG5-207ENST00000431043 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
SNHG5-207ENST00000431043 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
SNHG5-207ENST00000431043 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
SNHG5-207ENST00000431043 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
SNHG5-207ENST00000431043 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
SNHG5-207ENST00000431043 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
SNHG5-207ENST00000431043 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
SNHG5-207ENST00000431043 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
SNHG5-207ENST00000431043 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.32
SNHG5-207ENST00000431043 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
SNHG5-207ENST00000431043 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
SNHG5-207ENST00000431043 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
SNHG5-207ENST00000431043 WDR62O43379 1518 aa23.2■■□□□ 1.3
SNHG5-207ENST00000431043 WIZO95785 1651 aa23.02■■□□□ 1.28
SNHG5-207ENST00000431043 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
SNHG5-207ENST00000431043 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
SNHG5-207ENST00000431043 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
SNHG5-207ENST00000431043 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
SNHG5-207ENST00000431043 CFTRP13569 1480 aa22.86■■□□□ 1.25
SNHG5-207ENST00000431043 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
SNHG5-207ENST00000431043 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
SNHG5-207ENST00000431043 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
SNHG5-207ENST00000431043 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
SNHG5-207ENST00000431043 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
SNHG5-207ENST00000431043 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
SNHG5-207ENST00000431043 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
SNHG5-207ENST00000431043 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
SNHG5-207ENST00000431043 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
SNHG5-207ENST00000431043 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
SNHG5-207ENST00000431043 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
SNHG5-207ENST00000431043 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
SNHG5-207ENST00000431043 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
SNHG5-207ENST00000431043 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
SNHG5-207ENST00000431043 CHD1O14646 1710 aa22.38■■□□□ 1.17
SNHG5-207ENST00000431043 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.173e-11■■■■□ 23
SNHG5-207ENST00000431043 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
SNHG5-207ENST00000431043 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
SNHG5-207ENST00000431043 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
SNHG5-207ENST00000431043 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
SNHG5-207ENST00000431043 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SNHG5-207ENST00000431043 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
SNHG5-207ENST00000431043 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
SNHG5-207ENST00000431043 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
SNHG5-207ENST00000431043 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
SNHG5-207ENST00000431043 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
SNHG5-207ENST00000431043 SOGA1O94964 1423 aa22.08■■□□□ 1.13
SNHG5-207ENST00000431043 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
SNHG5-207ENST00000431043 SYNJ1O43426 1573 aa22■■□□□ 1.11
SNHG5-207ENST00000431043 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
SNHG5-207ENST00000431043 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
SNHG5-207ENST00000431043 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
SNHG5-207ENST00000431043 CUX1P39880 1505 aa21.96■■□□□ 1.11
SNHG5-207ENST00000431043 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
SNHG5-207ENST00000431043 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
SNHG5-207ENST00000431043 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
SNHG5-207ENST00000431043 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
SNHG5-207ENST00000431043 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
SNHG5-207ENST00000431043 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.07
SNHG5-207ENST00000431043 ABCA10Q8WWZ4 1543 aa21.72■■□□□ 1.07
SNHG5-207ENST00000431043 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
SNHG5-207ENST00000431043 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
SNHG5-207ENST00000431043 NUP160Q12769 1436 aa21.65■■□□□ 1.06
SNHG5-207ENST00000431043 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
SNHG5-207ENST00000431043 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
SNHG5-207ENST00000431043 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
SNHG5-207ENST00000431043 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
SNHG5-207ENST00000431043 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
SNHG5-207ENST00000431043 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
SNHG5-207ENST00000431043 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
SNHG5-207ENST00000431043 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
SNHG5-207ENST00000431043 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
SNHG5-207ENST00000431043 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms