RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
DDX39B-219ENST00000481456 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
DDX39B-219ENST00000481456 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.63
DDX39B-219ENST00000481456 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
DDX39B-219ENST00000481456 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
DDX39B-219ENST00000481456 HRCP23327 699 aa18.27■□□□□ 0.52
DDX39B-219ENST00000481456 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
DDX39B-219ENST00000481456 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
DDX39B-219ENST00000481456 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
DDX39B-219ENST00000481456 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
DDX39B-219ENST00000481456 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
DDX39B-219ENST00000481456 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
DDX39B-219ENST00000481456 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
DDX39B-219ENST00000481456 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
DDX39B-219ENST00000481456 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
DDX39B-219ENST00000481456 MYT1Q01538 1121 aa17.73■□□□□ 0.43
DDX39B-219ENST00000481456 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
DDX39B-219ENST00000481456 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
DDX39B-219ENST00000481456 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
DDX39B-219ENST00000481456 APLP2Q06481 763 aa17.49■□□□□ 0.39
DDX39B-219ENST00000481456 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.36
DDX39B-219ENST00000481456 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
DDX39B-219ENST00000481456 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
DDX39B-219ENST00000481456 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
DDX39B-219ENST00000481456 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
DDX39B-219ENST00000481456 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
DDX39B-219ENST00000481456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
DDX39B-219ENST00000481456 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
DDX39B-219ENST00000481456 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
DDX39B-219ENST00000481456 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
DDX39B-219ENST00000481456 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
DDX39B-219ENST00000481456 NEFLP07196 543 aa16.93■□□□□ 0.3
DDX39B-219ENST00000481456 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
DDX39B-219ENST00000481456 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
DDX39B-219ENST00000481456 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
DDX39B-219ENST00000481456 ZNF316A6NFI3 1004 aaPredicted RBP16.82■□□□□ 0.28
DDX39B-219ENST00000481456 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
DDX39B-219ENST00000481456 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
DDX39B-219ENST00000481456 ITGAEP38570 1179 aa16.57■□□□□ 0.24
DDX39B-219ENST00000481456 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
DDX39B-219ENST00000481456 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
DDX39B-219ENST00000481456 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
DDX39B-219ENST00000481456 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
DDX39B-219ENST00000481456 BCANQ96GW7 911 aa16.41■□□□□ 0.22
DDX39B-219ENST00000481456 ABCC9O60706 1549 aa16.39■□□□□ 0.21
DDX39B-219ENST00000481456 MIER1Q8N108 512 aa16.36■□□□□ 0.21
DDX39B-219ENST00000481456 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.21
DDX39B-219ENST00000481456 ANP32CO43423 234 aa16.29■□□□□ 0.2
DDX39B-219ENST00000481456 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
DDX39B-219ENST00000481456 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
DDX39B-219ENST00000481456 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
DDX39B-219ENST00000481456 EEA1Q15075 1411 aa16.22■□□□□ 0.19
DDX39B-219ENST00000481456 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
DDX39B-219ENST00000481456 FKBP8Q14318 412 aa16.18■□□□□ 0.18
DDX39B-219ENST00000481456 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
DDX39B-219ENST00000481456 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
DDX39B-219ENST00000481456 CLIP1P30622 1438 aa16.13■□□□□ 0.17
DDX39B-219ENST00000481456 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX39B-219ENST00000481456 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.16
DDX39B-219ENST00000481456 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
DDX39B-219ENST00000481456 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
DDX39B-219ENST00000481456 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
DDX39B-219ENST00000481456 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
DDX39B-219ENST00000481456 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
DDX39B-219ENST00000481456 NACADO15069 1562 aa15.99■□□□□ 0.15
DDX39B-219ENST00000481456 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
DDX39B-219ENST00000481456 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
DDX39B-219ENST00000481456 TRIM52Q96A61 297 aa15.98■□□□□ 0.15
DDX39B-219ENST00000481456 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
DDX39B-219ENST00000481456 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
DDX39B-219ENST00000481456 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
DDX39B-219ENST00000481456 TONSLQ96HA7 1378 aa15.93■□□□□ 0.14
DDX39B-219ENST00000481456 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX39B-219ENST00000481456 SOGA1O94964 1423 aa15.91■□□□□ 0.14
DDX39B-219ENST00000481456 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
DDX39B-219ENST00000481456 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
DDX39B-219ENST00000481456 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
DDX39B-219ENST00000481456 P3H3Q8IVL6 736 aa15.83■□□□□ 0.13
DDX39B-219ENST00000481456 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
DDX39B-219ENST00000481456 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
DDX39B-219ENST00000481456 WIZO95785 1651 aa15.77■□□□□ 0.11
DDX39B-219ENST00000481456 TSHZ2Q9NRE2 1034 aa15.75■□□□□ 0.11
DDX39B-219ENST00000481456 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
DDX39B-219ENST00000481456 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
DDX39B-219ENST00000481456 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
DDX39B-219ENST00000481456 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
DDX39B-219ENST00000481456 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
DDX39B-219ENST00000481456 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
DDX39B-219ENST00000481456 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
DDX39B-219ENST00000481456 NBR1Q14596 966 aa15.67■□□□□ 0.1
DDX39B-219ENST00000481456 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
DDX39B-219ENST00000481456 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
DDX39B-219ENST00000481456 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
DDX39B-219ENST00000481456 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
DDX39B-219ENST00000481456 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
DDX39B-219ENST00000481456 CCDC136Q96JN2 1154 aa15.65■□□□□ 0.1
DDX39B-219ENST00000481456 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
DDX39B-219ENST00000481456 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
DDX39B-219ENST00000481456 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
DDX39B-219ENST00000481456 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms