RNA–Protein interactions for RNA: ENST00000395080.7

SPP1-203, Transcript of secreted phosphoprotein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPP1, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-203ENST00000395080 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
SPP1-203ENST00000395080 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.07
SPP1-203ENST00000395080 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
SPP1-203ENST00000395080 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
SPP1-203ENST00000395080 ABCC9O60706 1549 aa25.27■■□□□ 1.64
SPP1-203ENST00000395080 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
SPP1-203ENST00000395080 NACADO15069 1562 aa24.14■■□□□ 1.46
SPP1-203ENST00000395080 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
SPP1-203ENST00000395080 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
SPP1-203ENST00000395080 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
SPP1-203ENST00000395080 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
SPP1-203ENST00000395080 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
SPP1-203ENST00000395080 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPP1-203ENST00000395080 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
SPP1-203ENST00000395080 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
SPP1-203ENST00000395080 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
SPP1-203ENST00000395080 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.34
SPP1-203ENST00000395080 SCRIBQ14160 1630 aa23.39■■□□□ 1.33
SPP1-203ENST00000395080 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
SPP1-203ENST00000395080 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
SPP1-203ENST00000395080 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
SPP1-203ENST00000395080 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
SPP1-203ENST00000395080 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
SPP1-203ENST00000395080 FOXD1Q16676 465 aa22.32■■□□□ 1.16
SPP1-203ENST00000395080 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
SPP1-203ENST00000395080 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
SPP1-203ENST00000395080 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
SPP1-203ENST00000395080 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
SPP1-203ENST00000395080 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
SPP1-203ENST00000395080 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
SPP1-203ENST00000395080 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
SPP1-203ENST00000395080 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
SPP1-203ENST00000395080 WIZO95785 1651 aa21.91■■□□□ 1.1
SPP1-203ENST00000395080 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
SPP1-203ENST00000395080 NESP48681 1621 aa21.83■■□□□ 1.09
SPP1-203ENST00000395080 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
SPP1-203ENST00000395080 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
SPP1-203ENST00000395080 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
SPP1-203ENST00000395080 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
SPP1-203ENST00000395080 CUX2O14529 1486 aa21.61■■□□□ 1.05
SPP1-203ENST00000395080 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
SPP1-203ENST00000395080 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
SPP1-203ENST00000395080 CFTRP13569 1480 aa21.5■■□□□ 1.03
SPP1-203ENST00000395080 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
SPP1-203ENST00000395080 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
SPP1-203ENST00000395080 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
SPP1-203ENST00000395080 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
SPP1-203ENST00000395080 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
SPP1-203ENST00000395080 WDR62O43379 1518 aa21.32■■□□□ 1
SPP1-203ENST00000395080 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
SPP1-203ENST00000395080 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
SPP1-203ENST00000395080 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
SPP1-203ENST00000395080 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
SPP1-203ENST00000395080 MSH5O43196 834 aa21.08■□□□□ 0.97
SPP1-203ENST00000395080 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
SPP1-203ENST00000395080 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
SPP1-203ENST00000395080 ABCC8Q09428 1581 aa21■□□□□ 0.95
SPP1-203ENST00000395080 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
SPP1-203ENST00000395080 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
SPP1-203ENST00000395080 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
SPP1-203ENST00000395080 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.93
SPP1-203ENST00000395080 POLA1P09884 1462 aaPredicted RBP20.85■□□□□ 0.93
SPP1-203ENST00000395080 CUX1P39880 1505 aa20.83■□□□□ 0.92
SPP1-203ENST00000395080 PIAS4Q8N2W9 510 aaPredicted RBP20.82■□□□□ 0.92
SPP1-203ENST00000395080 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
SPP1-203ENST00000395080 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
SPP1-203ENST00000395080 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
SPP1-203ENST00000395080 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SPP1-203ENST00000395080 SOGA1O94964 1423 aa20.76■□□□□ 0.91
SPP1-203ENST00000395080 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.91
SPP1-203ENST00000395080 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
SPP1-203ENST00000395080 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
SPP1-203ENST00000395080 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
SPP1-203ENST00000395080 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
SPP1-203ENST00000395080 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
SPP1-203ENST00000395080 SYNJ1O43426 1573 aa20.58■□□□□ 0.89
SPP1-203ENST00000395080 TOP2BQ02880 1626 aa20.58■□□□□ 0.88
SPP1-203ENST00000395080 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
SPP1-203ENST00000395080 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
SPP1-203ENST00000395080 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
SPP1-203ENST00000395080 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
SPP1-203ENST00000395080 ADRA2BP18089 450 aa20.53■□□□□ 0.88
SPP1-203ENST00000395080 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
SPP1-203ENST00000395080 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
SPP1-203ENST00000395080 FBLN2P98095 1184 aa20.5■□□□□ 0.87
SPP1-203ENST00000395080 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
SPP1-203ENST00000395080 CHD1O14646 1710 aa20.48■□□□□ 0.87
SPP1-203ENST00000395080 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
SPP1-203ENST00000395080 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
SPP1-203ENST00000395080 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
SPP1-203ENST00000395080 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
SPP1-203ENST00000395080 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
SPP1-203ENST00000395080 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
SPP1-203ENST00000395080 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
SPP1-203ENST00000395080 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
SPP1-203ENST00000395080 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
SPP1-203ENST00000395080 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
SPP1-203ENST00000395080 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
SPP1-203ENST00000395080 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
SPP1-203ENST00000395080 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms