RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
DDX39B-215ENST00000462256 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
DDX39B-215ENST00000462256 ABCC9O60706 1549 aa17.13■□□□□ 0.33
DDX39B-215ENST00000462256 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
DDX39B-215ENST00000462256 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
DDX39B-215ENST00000462256 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.233e-19■■□□□ 11.8
DDX39B-215ENST00000462256 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
DDX39B-215ENST00000462256 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
DDX39B-215ENST00000462256 NACADO15069 1562 aa15.97■□□□□ 0.15
DDX39B-215ENST00000462256 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
DDX39B-215ENST00000462256 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
DDX39B-215ENST00000462256 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
DDX39B-215ENST00000462256 MYO15BQ96JP2 1530 aa15.52■□□□□ 0.07
DDX39B-215ENST00000462256 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
DDX39B-215ENST00000462256 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
DDX39B-215ENST00000462256 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
DDX39B-215ENST00000462256 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
DDX39B-215ENST00000462256 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
DDX39B-215ENST00000462256 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
DDX39B-215ENST00000462256 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
DDX39B-215ENST00000462256 FBLN2P98095 1184 aa15.13■□□□□ 0.01
DDX39B-215ENST00000462256 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0.01
DDX39B-215ENST00000462256 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
DDX39B-215ENST00000462256 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
DDX39B-215ENST00000462256 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
DDX39B-215ENST00000462256 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.02
DDX39B-215ENST00000462256 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-215ENST00000462256 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
DDX39B-215ENST00000462256 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
DDX39B-215ENST00000462256 UBTFP17480 764 aaKnown RBP14.89□□□□□ -0.03
DDX39B-215ENST00000462256 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
DDX39B-215ENST00000462256 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
DDX39B-215ENST00000462256 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
DDX39B-215ENST00000462256 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
DDX39B-215ENST00000462256 APLP2Q06481 763 aa14.82□□□□□ -0.04
DDX39B-215ENST00000462256 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
DDX39B-215ENST00000462256 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
DDX39B-215ENST00000462256 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
DDX39B-215ENST00000462256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
DDX39B-215ENST00000462256 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
DDX39B-215ENST00000462256 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
DDX39B-215ENST00000462256 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
DDX39B-215ENST00000462256 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
DDX39B-215ENST00000462256 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
DDX39B-215ENST00000462256 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
DDX39B-215ENST00000462256 WIZO95785 1651 aa14.56□□□□□ -0.08
DDX39B-215ENST00000462256 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
DDX39B-215ENST00000462256 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
DDX39B-215ENST00000462256 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
DDX39B-215ENST00000462256 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
DDX39B-215ENST00000462256 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
DDX39B-215ENST00000462256 NESP48681 1621 aa14.5□□□□□ -0.09
DDX39B-215ENST00000462256 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
DDX39B-215ENST00000462256 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
DDX39B-215ENST00000462256 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
DDX39B-215ENST00000462256 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.1
DDX39B-215ENST00000462256 SOGA1O94964 1423 aa14.45□□□□□ -0.1
DDX39B-215ENST00000462256 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
DDX39B-215ENST00000462256 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
DDX39B-215ENST00000462256 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
DDX39B-215ENST00000462256 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
DDX39B-215ENST00000462256 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
DDX39B-215ENST00000462256 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
DDX39B-215ENST00000462256 CFTRP13569 1480 aa14.34□□□□□ -0.11
DDX39B-215ENST00000462256 CUX2O14529 1486 aa14.33□□□□□ -0.12
DDX39B-215ENST00000462256 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
DDX39B-215ENST00000462256 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
DDX39B-215ENST00000462256 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.12
DDX39B-215ENST00000462256 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
DDX39B-215ENST00000462256 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
DDX39B-215ENST00000462256 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
DDX39B-215ENST00000462256 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.147e-8■■■■□ 25.3
DDX39B-215ENST00000462256 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
DDX39B-215ENST00000462256 KCNH8Q96L42 1107 aa14.17□□□□□ -0.14
DDX39B-215ENST00000462256 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
DDX39B-215ENST00000462256 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
DDX39B-215ENST00000462256 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
DDX39B-215ENST00000462256 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
DDX39B-215ENST00000462256 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
DDX39B-215ENST00000462256 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
DDX39B-215ENST00000462256 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
DDX39B-215ENST00000462256 EEA1Q15075 1411 aa14.09□□□□□ -0.15
DDX39B-215ENST00000462256 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
DDX39B-215ENST00000462256 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.15
DDX39B-215ENST00000462256 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
DDX39B-215ENST00000462256 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
DDX39B-215ENST00000462256 ITGAEP38570 1179 aa14.04□□□□□ -0.16
DDX39B-215ENST00000462256 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
DDX39B-215ENST00000462256 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
DDX39B-215ENST00000462256 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
DDX39B-215ENST00000462256 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
DDX39B-215ENST00000462256 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
DDX39B-215ENST00000462256 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
DDX39B-215ENST00000462256 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
DDX39B-215ENST00000462256 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
DDX39B-215ENST00000462256 PTPRGP23470 1445 aa13.94□□□□□ -0.18
DDX39B-215ENST00000462256 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
DDX39B-215ENST00000462256 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
DDX39B-215ENST00000462256 IGF1RP08069 1367 aa13.92□□□□□ -0.18
DDX39B-215ENST00000462256 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms