RNA–Protein interactions for RNA: ENST00000546766.5

SLC25A3-204, Transcript of solute carrier family 25 member 3, humanhuman

TSL 1 (best)

Gene SLC25A3, Length 3,236 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-204ENST00000546766 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.11
SLC25A3-204ENST00000546766 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
SLC25A3-204ENST00000546766 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
SLC25A3-204ENST00000546766 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
SLC25A3-204ENST00000546766 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
SLC25A3-204ENST00000546766 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
SLC25A3-204ENST00000546766 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
SLC25A3-204ENST00000546766 ABCC9O60706 1549 aa17.75■□□□□ 0.43
SLC25A3-204ENST00000546766 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
SLC25A3-204ENST00000546766 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
SLC25A3-204ENST00000546766 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
SLC25A3-204ENST00000546766 NACADO15069 1562 aa17.44■□□□□ 0.38
SLC25A3-204ENST00000546766 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
SLC25A3-204ENST00000546766 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SLC25A3-204ENST00000546766 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
SLC25A3-204ENST00000546766 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
SLC25A3-204ENST00000546766 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
SLC25A3-204ENST00000546766 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
SLC25A3-204ENST00000546766 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
SLC25A3-204ENST00000546766 WIZO95785 1651 aa16.95■□□□□ 0.3
SLC25A3-204ENST00000546766 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
SLC25A3-204ENST00000546766 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
SLC25A3-204ENST00000546766 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
SLC25A3-204ENST00000546766 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
SLC25A3-204ENST00000546766 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
SLC25A3-204ENST00000546766 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
SLC25A3-204ENST00000546766 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
SLC25A3-204ENST00000546766 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
SLC25A3-204ENST00000546766 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
SLC25A3-204ENST00000546766 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
SLC25A3-204ENST00000546766 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
SLC25A3-204ENST00000546766 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
SLC25A3-204ENST00000546766 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SLC25A3-204ENST00000546766 HRCP23327 699 aa16.43■□□□□ 0.22
SLC25A3-204ENST00000546766 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
SLC25A3-204ENST00000546766 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
SLC25A3-204ENST00000546766 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
SLC25A3-204ENST00000546766 SOGA1O94964 1423 aa16.31■□□□□ 0.2
SLC25A3-204ENST00000546766 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
SLC25A3-204ENST00000546766 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
SLC25A3-204ENST00000546766 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
SLC25A3-204ENST00000546766 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
SLC25A3-204ENST00000546766 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
SLC25A3-204ENST00000546766 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
SLC25A3-204ENST00000546766 EEA1Q15075 1411 aa16.15■□□□□ 0.18
SLC25A3-204ENST00000546766 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
SLC25A3-204ENST00000546766 TTBK1Q5TCY1 1321 aaPredicted RBP16.13■□□□□ 0.17
SLC25A3-204ENST00000546766 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
SLC25A3-204ENST00000546766 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
SLC25A3-204ENST00000546766 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.17
SLC25A3-204ENST00000546766 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
SLC25A3-204ENST00000546766 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
SLC25A3-204ENST00000546766 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
SLC25A3-204ENST00000546766 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
SLC25A3-204ENST00000546766 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
SLC25A3-204ENST00000546766 CFTRP13569 1480 aa15.95■□□□□ 0.14
SLC25A3-204ENST00000546766 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
SLC25A3-204ENST00000546766 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
SLC25A3-204ENST00000546766 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
SLC25A3-204ENST00000546766 CUX1P39880 1505 aa15.9■□□□□ 0.14
SLC25A3-204ENST00000546766 CLIP1P30622 1438 aa15.89■□□□□ 0.13
SLC25A3-204ENST00000546766 KIF21BO75037 1637 aa15.89■□□□□ 0.13
SLC25A3-204ENST00000546766 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
SLC25A3-204ENST00000546766 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
SLC25A3-204ENST00000546766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
SLC25A3-204ENST00000546766 APLP2Q06481 763 aa15.82■□□□□ 0.12
SLC25A3-204ENST00000546766 KIF27Q86VH2 1401 aa15.82■□□□□ 0.12
SLC25A3-204ENST00000546766 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
SLC25A3-204ENST00000546766 PRXQ9BXM0 1461 aa15.76■□□□□ 0.11
SLC25A3-204ENST00000546766 MYT1Q01538 1121 aa15.75■□□□□ 0.11
SLC25A3-204ENST00000546766 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
SLC25A3-204ENST00000546766 CUX2O14529 1486 aa15.73■□□□□ 0.11
SLC25A3-204ENST00000546766 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.11
SLC25A3-204ENST00000546766 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
SLC25A3-204ENST00000546766 NESP48681 1621 aa15.7■□□□□ 0.1
SLC25A3-204ENST00000546766 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
SLC25A3-204ENST00000546766 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
SLC25A3-204ENST00000546766 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
SLC25A3-204ENST00000546766 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
SLC25A3-204ENST00000546766 IGF1RP08069 1367 aa15.66■□□□□ 0.1
SLC25A3-204ENST00000546766 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
SLC25A3-204ENST00000546766 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
SLC25A3-204ENST00000546766 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
SLC25A3-204ENST00000546766 KANK4Q5T7N3 995 aaPredicted RBP15.56■□□□□ 0.08
SLC25A3-204ENST00000546766 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
SLC25A3-204ENST00000546766 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
SLC25A3-204ENST00000546766 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
SLC25A3-204ENST00000546766 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
SLC25A3-204ENST00000546766 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
SLC25A3-204ENST00000546766 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
SLC25A3-204ENST00000546766 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
SLC25A3-204ENST00000546766 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
SLC25A3-204ENST00000546766 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
SLC25A3-204ENST00000546766 ABCA10Q8WWZ4 1543 aa15.47■□□□□ 0.07
SLC25A3-204ENST00000546766 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
SLC25A3-204ENST00000546766 ITGAEP38570 1179 aa15.42■□□□□ 0.06
SLC25A3-204ENST00000546766 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
SLC25A3-204ENST00000546766 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
SLC25A3-204ENST00000546766 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
SLC25A3-204ENST00000546766 GAPVD1Q14C86 1478 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms