RNA–Protein interactions for RNA: ENST00000623163.3

SNHG5-215, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 5

Gene SNHG5, Length 851 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-215ENST00000623163 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
SNHG5-215ENST00000623163 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
SNHG5-215ENST00000623163 ABCC9O60706 1549 aa32.92■■■□□ 2.86
SNHG5-215ENST00000623163 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
SNHG5-215ENST00000623163 NACADO15069 1562 aa31.17■■■□□ 2.58
SNHG5-215ENST00000623163 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
SNHG5-215ENST00000623163 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
SNHG5-215ENST00000623163 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
SNHG5-215ENST00000623163 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
SNHG5-215ENST00000623163 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
SNHG5-215ENST00000623163 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
SNHG5-215ENST00000623163 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
SNHG5-215ENST00000623163 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
SNHG5-215ENST00000623163 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
SNHG5-215ENST00000623163 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
SNHG5-215ENST00000623163 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
SNHG5-215ENST00000623163 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
SNHG5-215ENST00000623163 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
SNHG5-215ENST00000623163 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
SNHG5-215ENST00000623163 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
SNHG5-215ENST00000623163 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
SNHG5-215ENST00000623163 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
SNHG5-215ENST00000623163 CUX2O14529 1486 aa28.56■■■□□ 2.16
SNHG5-215ENST00000623163 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
SNHG5-215ENST00000623163 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SNHG5-215ENST00000623163 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SNHG5-215ENST00000623163 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
SNHG5-215ENST00000623163 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
SNHG5-215ENST00000623163 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
SNHG5-215ENST00000623163 NESP48681 1621 aa28.28■■■□□ 2.12
SNHG5-215ENST00000623163 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
SNHG5-215ENST00000623163 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
SNHG5-215ENST00000623163 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
SNHG5-215ENST00000623163 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
SNHG5-215ENST00000623163 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
SNHG5-215ENST00000623163 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
SNHG5-215ENST00000623163 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
SNHG5-215ENST00000623163 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
SNHG5-215ENST00000623163 WIZO95785 1651 aa27.8■■■□□ 2.04
SNHG5-215ENST00000623163 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
SNHG5-215ENST00000623163 WDR62O43379 1518 aa27.69■■■□□ 2.02
SNHG5-215ENST00000623163 CFTRP13569 1480 aa27.55■■■□□ 2
SNHG5-215ENST00000623163 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
SNHG5-215ENST00000623163 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
SNHG5-215ENST00000623163 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
SNHG5-215ENST00000623163 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
SNHG5-215ENST00000623163 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
SNHG5-215ENST00000623163 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
SNHG5-215ENST00000623163 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
SNHG5-215ENST00000623163 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
SNHG5-215ENST00000623163 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
SNHG5-215ENST00000623163 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
SNHG5-215ENST00000623163 TOPBP1Q92547 1522 aa27■■□□□ 1.91
SNHG5-215ENST00000623163 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
SNHG5-215ENST00000623163 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
SNHG5-215ENST00000623163 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
SNHG5-215ENST00000623163 RIMBP3CA6NJZ7 1639 aa26.84■■□□□ 1.89
SNHG5-215ENST00000623163 RIMBP3BA6NNM3 1639 aa26.84■■□□□ 1.89
SNHG5-215ENST00000623163 RIMBP3Q9UFD9 1639 aa26.84■■□□□ 1.89
SNHG5-215ENST00000623163 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
SNHG5-215ENST00000623163 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
SNHG5-215ENST00000623163 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
SNHG5-215ENST00000623163 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
SNHG5-215ENST00000623163 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.863e-11■■■■□ 23
SNHG5-215ENST00000623163 CHD1O14646 1710 aa26.66■■□□□ 1.86
SNHG5-215ENST00000623163 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
SNHG5-215ENST00000623163 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
SNHG5-215ENST00000623163 SOGA1O94964 1423 aa26.55■■□□□ 1.84
SNHG5-215ENST00000623163 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
SNHG5-215ENST00000623163 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
SNHG5-215ENST00000623163 ARAP1Q96P48 1450 aa26.48■■□□□ 1.83
SNHG5-215ENST00000623163 CYB5RLQ6IPT4 315 aa26.47■■□□□ 1.83
SNHG5-215ENST00000623163 CUX1P39880 1505 aa26.47■■□□□ 1.83
SNHG5-215ENST00000623163 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
SNHG5-215ENST00000623163 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
SNHG5-215ENST00000623163 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
SNHG5-215ENST00000623163 FBLN2P98095 1184 aa26.4■■□□□ 1.82
SNHG5-215ENST00000623163 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
SNHG5-215ENST00000623163 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
SNHG5-215ENST00000623163 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
SNHG5-215ENST00000623163 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
SNHG5-215ENST00000623163 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
SNHG5-215ENST00000623163 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
SNHG5-215ENST00000623163 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
SNHG5-215ENST00000623163 ABCA5Q8WWZ7 1642 aa26.22■■□□□ 1.79
SNHG5-215ENST00000623163 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
SNHG5-215ENST00000623163 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
SNHG5-215ENST00000623163 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
SNHG5-215ENST00000623163 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
SNHG5-215ENST00000623163 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
SNHG5-215ENST00000623163 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
SNHG5-215ENST00000623163 NUP160Q12769 1436 aa25.99■■□□□ 1.75
SNHG5-215ENST00000623163 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
SNHG5-215ENST00000623163 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
SNHG5-215ENST00000623163 ERCC6L2Q5T890 1561 aa25.92■■□□□ 1.74
SNHG5-215ENST00000623163 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
SNHG5-215ENST00000623163 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
SNHG5-215ENST00000623163 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
SNHG5-215ENST00000623163 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
SNHG5-215ENST00000623163 JPH4Q96JJ6 628 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms