Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.97■■■□□ 2.71
USP16Q9Y5T5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
USP16Q9Y5T5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
USP16Q9Y5T5 RP9P-202ENST00000450133 1212 ntBASIC31.96■■■□□ 2.71
USP16Q9Y5T5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
USP16Q9Y5T5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
USP16Q9Y5T5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.95■■■□□ 2.71
USP16Q9Y5T5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
USP16Q9Y5T5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
USP16Q9Y5T5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
USP16Q9Y5T5 AC093536.1-201ENST00000569153 554 ntBASIC31.93■■■□□ 2.7
USP16Q9Y5T5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP16Q9Y5T5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP16Q9Y5T5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.92■■■□□ 2.7
USP16Q9Y5T5 RAP2CP1-202ENST00000605179 643 ntBASIC31.92■■■□□ 2.7
USP16Q9Y5T5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
USP16Q9Y5T5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.91■■■□□ 2.7
USP16Q9Y5T5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
USP16Q9Y5T5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
USP16Q9Y5T5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
USP16Q9Y5T5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.9■■■□□ 2.7
USP16Q9Y5T5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP16Q9Y5T5 RARRES2P1-201ENST00000474487 481 ntBASIC31.9■■■□□ 2.7
USP16Q9Y5T5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.9■■■□□ 2.7
USP16Q9Y5T5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.89■■■□□ 2.7
USP16Q9Y5T5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
USP16Q9Y5T5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP16Q9Y5T5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.88■■■□□ 2.69
USP16Q9Y5T5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
USP16Q9Y5T5 AC139426.1-201ENST00000568218 2529 ntBASIC31.88■■■□□ 2.69
USP16Q9Y5T5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 SPCS2P3-201ENST00000500401 656 ntBASIC31.87■■■□□ 2.69
USP16Q9Y5T5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.87■■■□□ 2.69
USP16Q9Y5T5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
USP16Q9Y5T5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP16Q9Y5T5 DUX4L9-201ENST00000449051 1259 ntBASIC31.85■■■□□ 2.69
USP16Q9Y5T5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.85■■■□□ 2.69
USP16Q9Y5T5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.85■■■□□ 2.69
USP16Q9Y5T5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
USP16Q9Y5T5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP16Q9Y5T5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 AL359504.2-201ENST00000605506 1601 ntBASIC31.84■■■□□ 2.69
USP16Q9Y5T5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.84■■■□□ 2.69
USP16Q9Y5T5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
USP16Q9Y5T5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
USP16Q9Y5T5 MIR3960-201ENST00000583311 91 ntBASIC31.82■■■□□ 2.68
USP16Q9Y5T5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
USP16Q9Y5T5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
USP16Q9Y5T5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.81■■■□□ 2.68
USP16Q9Y5T5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.81■■■□□ 2.68
USP16Q9Y5T5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP16Q9Y5T5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP16Q9Y5T5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
USP16Q9Y5T5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP16Q9Y5T5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP16Q9Y5T5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
USP16Q9Y5T5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.79■■■□□ 2.68
USP16Q9Y5T5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
USP16Q9Y5T5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
USP16Q9Y5T5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.78■■■□□ 2.68
USP16Q9Y5T5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
USP16Q9Y5T5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.77■■■□□ 2.68
USP16Q9Y5T5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
USP16Q9Y5T5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
USP16Q9Y5T5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
USP16Q9Y5T5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.77■■■□□ 2.68
USP16Q9Y5T5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
USP16Q9Y5T5 WHAMMP3-201ENST00000611636 1609 ntBASIC31.76■■■□□ 2.67
USP16Q9Y5T5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP16Q9Y5T5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
USP16Q9Y5T5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
USP16Q9Y5T5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.73■■■□□ 2.67
USP16Q9Y5T5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
USP16Q9Y5T5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
USP16Q9Y5T5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
USP16Q9Y5T5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
USP16Q9Y5T5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.71■■■□□ 2.67
USP16Q9Y5T5 DRD5P2-201ENST00000421395 2012 ntBASIC31.71■■■□□ 2.67
USP16Q9Y5T5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms