RNA–Protein interactions for RNA: ENST00000500401.2

SPCS2P3-201, Transcript of signal peptidase complex subunit 2 pseudogene 3, humanhuman

BASIC

Gene SPCS2P3, Length 656 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2P3-201ENST00000500401 NISCHQ9Y2I1 1504 aa59.22■■■■■ 7.07
SPCS2P3-201ENST00000500401 CCDC180Q9P1Z9 1646 aa52.66■■■■■ 6.02
SPCS2P3-201ENST00000500401 ABCC9O60706 1549 aa51.76■■■■■ 5.88
SPCS2P3-201ENST00000500401 RB1CC1Q8TDY2 1594 aa49.62■■■■■ 5.53
SPCS2P3-201ENST00000500401 DCAF8L2P0C7V8 631 aa49.52■■■■■ 5.52
SPCS2P3-201ENST00000500401 NACADO15069 1562 aa49.51■■■■■ 5.52
SPCS2P3-201ENST00000500401 ZCCHC6Q5VYS8 1495 aaKnown RBP49.31■■■■■ 5.48
SPCS2P3-201ENST00000500401 MYO15BQ96JP2 1530 aa49.14■■■■■ 5.46
SPCS2P3-201ENST00000500401 DCAF1Q9Y4B6 1507 aa48.91■■■■■ 5.42
SPCS2P3-201ENST00000500401 UNC13AQ9UPW8 1703 aa48.66■■■■■ 5.38
SPCS2P3-201ENST00000500401 PABPN1Q86U42 306 aaKnown RBP eCLIP48.36■■■■■ 5.33
SPCS2P3-201ENST00000500401 BICRAQ9NZM4 1560 aa48.26■■■■■ 5.32
SPCS2P3-201ENST00000500401 DNAJC5BQ9UF47 199 aa48.18■■■■■ 5.3
SPCS2P3-201ENST00000500401 SCRIBQ14160 1630 aa48.14■■■■■ 5.3
SPCS2P3-201ENST00000500401 SHROOM4Q9ULL8 1493 aa47.51■■■■■ 5.2
SPCS2P3-201ENST00000500401 EIF4G1Q04637 1599 aaKnown RBP46.94■■■■■ 5.1
SPCS2P3-201ENST00000500401 CC2D2AQ9P2K1 1620 aa46.8■■■■■ 5.08
SPCS2P3-201ENST00000500401 CECR2Q9BXF3 1484 aa46.47■■■■■ 5.03
SPCS2P3-201ENST00000500401 SMARCA4P51532 1647 aa45.99■■■■■ 4.95
SPCS2P3-201ENST00000500401 BAZ1AQ9NRL2 1556 aaPredicted RBP45.85■■■■■ 4.93
SPCS2P3-201ENST00000500401 ATAD2BQ9ULI0 1458 aa45.77■■■■■ 4.92
SPCS2P3-201ENST00000500401 NCAPD3P42695 1498 aa45.72■■■■■ 4.91
SPCS2P3-201ENST00000500401 MROH2BQ7Z745 1585 aa45.71■■■■■ 4.91
SPCS2P3-201ENST00000500401 SMARCA2P51531 1590 aa45.62■■■■■ 4.89
SPCS2P3-201ENST00000500401 PEG3Q9GZU2 1588 aa45.5■■■■■ 4.87
SPCS2P3-201ENST00000500401 HMGXB3Q12766 1538 aa45.48■■■■■ 4.87
SPCS2P3-201ENST00000500401 BAZ1BQ9UIG0 1483 aaKnown RBP45.35■■■■■ 4.85
SPCS2P3-201ENST00000500401 WIZO95785 1651 aa45.21■■■■■ 4.83
SPCS2P3-201ENST00000500401 RSF1Q96T23 1441 aaPredicted RBP45.09■■■■■ 4.81
SPCS2P3-201ENST00000500401 NESP48681 1621 aa44.8■■■■■ 4.76
SPCS2P3-201ENST00000500401 TOP2AP11388 1531 aaKnown RBP44.64■■■■■ 4.74
SPCS2P3-201ENST00000500401 DNAJC5Q9H3Z4 198 aa44.61■■■■■ 4.73
SPCS2P3-201ENST00000500401 ERCC6Q03468 1493 aa44.53■■■■■ 4.72
SPCS2P3-201ENST00000500401 LAMC3Q9Y6N6 1575 aa44.52■■■■■ 4.72
SPCS2P3-201ENST00000500401 CADPSQ9ULU8 1353 aa44.38■■■■■ 4.69
SPCS2P3-201ENST00000500401 CUX2O14529 1486 aa44.29■■■■■ 4.68
SPCS2P3-201ENST00000500401 KIF21AQ7Z4S6 1674 aa44.25■■■■■ 4.67
SPCS2P3-201ENST00000500401 PDS5BQ9NTI5 1447 aa44.18■■■■■ 4.66
SPCS2P3-201ENST00000500401 CCDC88BA6NC98 1476 aa44.15■■■■■ 4.66
SPCS2P3-201ENST00000500401 THOC2Q8NI27 1593 aaKnown RBP44.11■■■■■ 4.65
SPCS2P3-201ENST00000500401 CFTRP13569 1480 aa44.1■■■■■ 4.65
SPCS2P3-201ENST00000500401 FANCD2Q9BXW9 1451 aa43.9■■■■■ 4.62
SPCS2P3-201ENST00000500401 SUPT5HO00267 1087 aaKnown RBP43.84■■■■■ 4.61
SPCS2P3-201ENST00000500401 CEP164Q9UPV0 1460 aa43.83■■■■■ 4.61
SPCS2P3-201ENST00000500401 MRC2Q9UBG0 1479 aa43.81■■■■■ 4.6
SPCS2P3-201ENST00000500401 PRDM2Q13029 1718 aa43.78■■■■■ 4.6
SPCS2P3-201ENST00000500401 WDR62O43379 1518 aa43.69■■■■■ 4.59
SPCS2P3-201ENST00000500401 URB2Q14146 1524 aaKnown RBP43.53■■■■■ 4.56
SPCS2P3-201ENST00000500401 TOPBP1Q92547 1522 aa43.21■■■■■ 4.51
SPCS2P3-201ENST00000500401 DNMBPQ6XZF7 1577 aa43.12■■■■■ 4.49
SPCS2P3-201ENST00000500401 ABCC8Q09428 1581 aa43.05■■■■■ 4.48
SPCS2P3-201ENST00000500401 IFT140Q96RY7 1462 aa42.9■■■■■ 4.46
SPCS2P3-201ENST00000500401 CUX1P39880 1505 aa42.87■■■■■ 4.45
SPCS2P3-201ENST00000500401 ZNF608Q9ULD9 1512 aaPredicted RBP42.85■■■■■ 4.45
SPCS2P3-201ENST00000500401 POLA1P09884 1462 aaPredicted RBP42.84■■■■■ 4.45
SPCS2P3-201ENST00000500401 TARBP1Q13395 1621 aaKnown RBP42.77■■■■■ 4.44
SPCS2P3-201ENST00000500401 FGD5Q6ZNL6 1462 aa42.72■■■■■ 4.43
SPCS2P3-201ENST00000500401 RAD54L2Q9Y4B4 1467 aa42.7■■■■■ 4.43
SPCS2P3-201ENST00000500401 EIF4G3O43432 1585 aaKnown RBP42.63■■■■■ 4.41
SPCS2P3-201ENST00000500401 SOGA1O94964 1423 aa42.61■■■■■ 4.41
SPCS2P3-201ENST00000500401 AQRO60306 1485 aaKnown RBP eCLIP42.55■■■■■ 4.4
SPCS2P3-201ENST00000500401 SYNJ1O43426 1573 aa42.47■■■■■ 4.39
SPCS2P3-201ENST00000500401 WRNQ14191 1432 aaPredicted RBP eCLIP42.46■■■■■ 4.39
SPCS2P3-201ENST00000500401 TDRD9Q8NDG6 1382 aaKnown RBP42.44■■■■■ 4.38
SPCS2P3-201ENST00000500401 TRIM41Q8WV44 630 aa42.43■■■■■ 4.38
SPCS2P3-201ENST00000500401 BIVM-ERCC5R4GMW8 1640 aa42.42■■■■■ 4.38
SPCS2P3-201ENST00000500401 WDR97A6NE52 1622 aa42.41■■■■■ 4.38
SPCS2P3-201ENST00000500401 TOP2BQ02880 1626 aa42.41■■■■■ 4.38
SPCS2P3-201ENST00000500401 ABCA10Q8WWZ4 1543 aa42.25■■■■■ 4.35
SPCS2P3-201ENST00000500401 OSCARQ8IYS5 282 aa42.22■■■■■ 4.35
SPCS2P3-201ENST00000500401 CHD1O14646 1710 aa42.15■■■■■ 4.34
SPCS2P3-201ENST00000500401 ABCA5Q8WWZ7 1642 aa42.14■■■■■ 4.34
SPCS2P3-201ENST00000500401 SNAPC4Q5SXM2 1469 aa42.14■■■■■ 4.34
SPCS2P3-201ENST00000500401 GAPVD1Q14C86 1478 aa42.12■■■■■ 4.33
SPCS2P3-201ENST00000500401 GRIN2BQ13224 1484 aa42.11■■■■■ 4.33
SPCS2P3-201ENST00000500401 PBRM1Q86U86 1689 aa42.09■■■■■ 4.33
SPCS2P3-201ENST00000500401 FBLN2P98095 1184 aa42■■■■■ 4.31
SPCS2P3-201ENST00000500401 MAGI1Q96QZ7 1491 aaPredicted RBP41.99■■■■■ 4.31
SPCS2P3-201ENST00000500401 SYNJ2O15056 1496 aa41.85■■■■■ 4.29
SPCS2P3-201ENST00000500401 CHMP7Q8WUX9 453 aaPredicted RBP41.82■■■■■ 4.29
SPCS2P3-201ENST00000500401 ADAMTS12P58397 1594 aa41.75■■■■■ 4.27
SPCS2P3-201ENST00000500401 ERICH3Q5RHP9 1530 aa41.71■■■■■ 4.27
SPCS2P3-201ENST00000500401 RIMBP3CA6NJZ7 1639 aa41.69■■■■■ 4.26
SPCS2P3-201ENST00000500401 RIMBP3BA6NNM3 1639 aa41.69■■■■■ 4.26
SPCS2P3-201ENST00000500401 RIMBP3Q9UFD9 1639 aa41.69■■■■■ 4.26
SPCS2P3-201ENST00000500401 CLASP1Q7Z460 1538 aa41.66■■■■■ 4.26
SPCS2P3-201ENST00000500401 ARHGEF11O15085 1522 aa41.64■■■■■ 4.26
SPCS2P3-201ENST00000500401 FHAD1B1AJZ9 1412 aa41.61■■■■■ 4.25
SPCS2P3-201ENST00000500401 GRIN2AQ12879 1464 aa41.6■■■■■ 4.25
SPCS2P3-201ENST00000500401 KIF27Q86VH2 1401 aa41.54■■■■■ 4.24
SPCS2P3-201ENST00000500401 CEP170Q5SW79 1584 aa41.47■■■■■ 4.23
SPCS2P3-201ENST00000500401 IGF1RP08069 1367 aa41.47■■■■■ 4.23
SPCS2P3-201ENST00000500401 NUP160Q12769 1436 aa41.44■■■■■ 4.22
SPCS2P3-201ENST00000500401 ARAP1Q96P48 1450 aa41.33■■■■■ 4.21
SPCS2P3-201ENST00000500401 RUSC2Q8N2Y8 1516 aa41.33■■■■■ 4.21
SPCS2P3-201ENST00000500401 CUL7Q14999 1698 aa41.3■■■■■ 4.2
SPCS2P3-201ENST00000500401 CYB5RLQ6IPT4 315 aa41.24■■■■■ 4.19
SPCS2P3-201ENST00000500401 CARMIL1Q5VZK9 1371 aa41.18■■■■■ 4.18
SPCS2P3-201ENST00000500401 ERCC6L2Q5T890 1561 aa41.17■■■■■ 4.18
SPCS2P3-201ENST00000500401 SHROOM2Q13796 1616 aa41.15■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms