RNA–Protein interactions for RNA: ENST00000587834.5

SEC11C-204, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11C, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-204ENST00000587834 NISCHQ9Y2I1 1504 aa59.94■■■■■ 7.19
SEC11C-204ENST00000587834 CCDC180Q9P1Z9 1646 aa53.77■■■■■ 6.2
SEC11C-204ENST00000587834 ABCC9O60706 1549 aa53.44■■■■■ 6.15
SEC11C-204ENST00000587834 RB1CC1Q8TDY2 1594 aa50.99■■■■■ 5.75
SEC11C-204ENST00000587834 NACADO15069 1562 aa50.68■■■■■ 5.7
SEC11C-204ENST00000587834 DCAF8L2P0C7V8 631 aa50.34■■■■■ 5.65
SEC11C-204ENST00000587834 MYO15BQ96JP2 1530 aa50.04■■■■■ 5.6
SEC11C-204ENST00000587834 UNC13AQ9UPW8 1703 aa50.01■■■■■ 5.6
SEC11C-204ENST00000587834 DNAJC5BQ9UF47 199 aa49.81■■■■■ 5.56
SEC11C-204ENST00000587834 ZCCHC6Q5VYS8 1495 aaKnown RBP49.76■■■■■ 5.56
SEC11C-204ENST00000587834 PABPN1Q86U42 306 aaKnown RBP eCLIP49.71■■■■■ 5.55
SEC11C-204ENST00000587834 BICRAQ9NZM4 1560 aa49.54■■■■■ 5.52
SEC11C-204ENST00000587834 DCAF1Q9Y4B6 1507 aa49.51■■■■■ 5.52
SEC11C-204ENST00000587834 SCRIBQ14160 1630 aa49.02■■■■■ 5.44
SEC11C-204ENST00000587834 SHROOM4Q9ULL8 1493 aa48.83■■■■■ 5.41
SEC11C-204ENST00000587834 CC2D2AQ9P2K1 1620 aa48.33■■■■■ 5.33
SEC11C-204ENST00000587834 EIF4G1Q04637 1599 aaKnown RBP48.29■■■■■ 5.32
SEC11C-204ENST00000587834 CECR2Q9BXF3 1484 aa48.09■■■■■ 5.29
SEC11C-204ENST00000587834 SMARCA4P51532 1647 aa46.77■■■■■ 5.08
SEC11C-204ENST00000587834 NCAPD3P42695 1498 aa46.73■■■■■ 5.07
SEC11C-204ENST00000587834 ATAD2BQ9ULI0 1458 aa46.67■■■■■ 5.06
SEC11C-204ENST00000587834 SMARCA2P51531 1590 aa46.57■■■■■ 5.05
SEC11C-204ENST00000587834 BAZ1AQ9NRL2 1556 aaPredicted RBP46.52■■■■■ 5.04
SEC11C-204ENST00000587834 HMGXB3Q12766 1538 aa46.5■■■■■ 5.03
SEC11C-204ENST00000587834 PEG3Q9GZU2 1588 aa46.28■■■■■ 5
SEC11C-204ENST00000587834 BAZ1BQ9UIG0 1483 aaKnown RBP46.25■■■■■ 4.99
SEC11C-204ENST00000587834 MROH2BQ7Z745 1585 aa46.22■■■■■ 4.99
SEC11C-204ENST00000587834 ERCC6Q03468 1493 aa46.1■■■■■ 4.97
SEC11C-204ENST00000587834 NESP48681 1621 aa46■■■■■ 4.95
SEC11C-204ENST00000587834 CUX2O14529 1486 aa45.93■■■■■ 4.94
SEC11C-204ENST00000587834 WIZO95785 1651 aa45.73■■■■■ 4.91
SEC11C-204ENST00000587834 LAMC3Q9Y6N6 1575 aa45.71■■■■■ 4.91
SEC11C-204ENST00000587834 THOC2Q8NI27 1593 aaKnown RBP45.56■■■■■ 4.88
SEC11C-204ENST00000587834 KIF21AQ7Z4S6 1674 aa45.53■■■■■ 4.88
SEC11C-204ENST00000587834 DNAJC5Q9H3Z4 198 aa45.49■■■■■ 4.87
SEC11C-204ENST00000587834 PDS5BQ9NTI5 1447 aa45.35■■■■■ 4.85
SEC11C-204ENST00000587834 CADPSQ9ULU8 1353 aa45.31■■■■■ 4.84
SEC11C-204ENST00000587834 RSF1Q96T23 1441 aaPredicted RBP45.29■■■■■ 4.84
SEC11C-204ENST00000587834 TOP2AP11388 1531 aaKnown RBP45.13■■■■■ 4.82
SEC11C-204ENST00000587834 MRC2Q9UBG0 1479 aa45.02■■■■■ 4.8
SEC11C-204ENST00000587834 WDR62O43379 1518 aa44.94■■■■■ 4.78
SEC11C-204ENST00000587834 CEP164Q9UPV0 1460 aa44.9■■■■■ 4.78
SEC11C-204ENST00000587834 CFTRP13569 1480 aa44.89■■■■■ 4.78
SEC11C-204ENST00000587834 FANCD2Q9BXW9 1451 aa44.86■■■■■ 4.77
SEC11C-204ENST00000587834 PRDM2Q13029 1718 aa44.67■■■■■ 4.74
SEC11C-204ENST00000587834 CCDC88BA6NC98 1476 aa44.56■■■■■ 4.72
SEC11C-204ENST00000587834 URB2Q14146 1524 aaKnown RBP44.5■■■■■ 4.71
SEC11C-204ENST00000587834 TOPBP1Q92547 1522 aa44.06■■■■■ 4.64
SEC11C-204ENST00000587834 IFT140Q96RY7 1462 aa43.96■■■■■ 4.63
SEC11C-204ENST00000587834 DNMBPQ6XZF7 1577 aa43.95■■■■■ 4.63
SEC11C-204ENST00000587834 ZNF608Q9ULD9 1512 aaPredicted RBP43.91■■■■■ 4.62
SEC11C-204ENST00000587834 ABCC8Q09428 1581 aa43.9■■■■■ 4.62
SEC11C-204ENST00000587834 EIF4G3O43432 1585 aaKnown RBP43.76■■■■■ 4.6
SEC11C-204ENST00000587834 OSCARQ8IYS5 282 aa43.74■■■■■ 4.59
SEC11C-204ENST00000587834 TARBP1Q13395 1621 aaKnown RBP43.7■■■■■ 4.59
SEC11C-204ENST00000587834 TRIM41Q8WV44 630 aa43.66■■■■■ 4.58
SEC11C-204ENST00000587834 POLA1P09884 1462 aaPredicted RBP43.63■■■■■ 4.57
SEC11C-204ENST00000587834 AQRO60306 1485 aaKnown RBP eCLIP43.5■■■■■ 4.553e-6■■□□□ 13.8
SEC11C-204ENST00000587834 RAD54L2Q9Y4B4 1467 aa43.45■■■■■ 4.55
SEC11C-204ENST00000587834 CUX1P39880 1505 aa43.43■■■■■ 4.54
SEC11C-204ENST00000587834 CHD1O14646 1710 aa43.42■■■■■ 4.54
SEC11C-204ENST00000587834 SUPT5HO00267 1087 aaKnown RBP43.41■■■■■ 4.54
SEC11C-204ENST00000587834 FGD5Q6ZNL6 1462 aa43.39■■■■■ 4.54
SEC11C-204ENST00000587834 RIMBP3CA6NJZ7 1639 aa43.37■■■■■ 4.53
SEC11C-204ENST00000587834 RIMBP3BA6NNM3 1639 aa43.37■■■■■ 4.53
SEC11C-204ENST00000587834 RIMBP3Q9UFD9 1639 aa43.37■■■■■ 4.53
SEC11C-204ENST00000587834 SOGA1O94964 1423 aa43.35■■■■■ 4.53
SEC11C-204ENST00000587834 WDR97A6NE52 1622 aa43.24■■■■■ 4.51
SEC11C-204ENST00000587834 TDRD9Q8NDG6 1382 aaKnown RBP43.24■■■■■ 4.51
SEC11C-204ENST00000587834 ARHGEF11O15085 1522 aa43.21■■■■■ 4.51
SEC11C-204ENST00000587834 SNAPC4Q5SXM2 1469 aa43.12■■■■■ 4.49
SEC11C-204ENST00000587834 FBLN2P98095 1184 aa43.09■■■■■ 4.49
SEC11C-204ENST00000587834 PBRM1Q86U86 1689 aa43.01■■■■■ 4.48
SEC11C-204ENST00000587834 GRIN2BQ13224 1484 aa42.99■■■■■ 4.47
SEC11C-204ENST00000587834 MAGI1Q96QZ7 1491 aaPredicted RBP42.98■■■■■ 4.47
SEC11C-204ENST00000587834 ABCA5Q8WWZ7 1642 aa42.9■■■■■ 4.46
SEC11C-204ENST00000587834 ABCA10Q8WWZ4 1543 aa42.9■■■■■ 4.46
SEC11C-204ENST00000587834 GAPVD1Q14C86 1478 aa42.87■■■■■ 4.45
SEC11C-204ENST00000587834 CLASP1Q7Z460 1538 aa42.86■■■■■ 4.45
SEC11C-204ENST00000587834 BIVM-ERCC5R4GMW8 1640 aa42.84■■■■■ 4.45
SEC11C-204ENST00000587834 SYNJ2O15056 1496 aa42.83■■■■■ 4.45
SEC11C-204ENST00000587834 SYNJ1O43426 1573 aa42.82■■■■■ 4.45
SEC11C-204ENST00000587834 ARAP1Q96P48 1450 aa42.81■■■■■ 4.44
SEC11C-204ENST00000587834 TOP2BQ02880 1626 aa42.8■■■■■ 4.44
SEC11C-204ENST00000587834 CHMP7Q8WUX9 453 aaPredicted RBP42.79■■■■■ 4.44
SEC11C-204ENST00000587834 CYB5RLQ6IPT4 315 aa42.74■■■■■ 4.43
SEC11C-204ENST00000587834 WRNQ14191 1432 aaPredicted RBP eCLIP42.72■■■■■ 4.43
SEC11C-204ENST00000587834 ADAMTS12P58397 1594 aa42.56■■■■■ 4.4
SEC11C-204ENST00000587834 GRIN2AQ12879 1464 aa42.47■■■■■ 4.39
SEC11C-204ENST00000587834 ERICH3Q5RHP9 1530 aa42.37■■■■■ 4.37
SEC11C-204ENST00000587834 CEP170Q5SW79 1584 aa42.36■■■■■ 4.37
SEC11C-204ENST00000587834 FHAD1B1AJZ9 1412 aa42.32■■■■■ 4.37
SEC11C-204ENST00000587834 NUP160Q12769 1436 aa42.29■■■■■ 4.36
SEC11C-204ENST00000587834 ERCC6L2Q5T890 1561 aa42.22■■■■■ 4.35
SEC11C-204ENST00000587834 TRHP20396 242 aaPredicted RBP42.17■■■■■ 4.34
SEC11C-204ENST00000587834 SHROOM2Q13796 1616 aa42.17■■■■■ 4.34
SEC11C-204ENST00000587834 RUSC2Q8N2Y8 1516 aa41.97■■■■■ 4.31
SEC11C-204ENST00000587834 KIF27Q86VH2 1401 aa41.87■■■■■ 4.29
SEC11C-204ENST00000587834 CUL7Q14999 1698 aa41.87■■■■■ 4.29
SEC11C-204ENST00000587834 PRG4Q92954 1404 aaPredicted RBP41.84■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms