Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDH20Q9HBT6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH20Q9HBT6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDH20Q9HBT6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH20Q9HBT6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CDH20Q9HBT6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 AC022413.1-201ENST00000624602 984 ntBASIC21.51■■□□□ 1.03
CDH20Q9HBT6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH20Q9HBT6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH20Q9HBT6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH20Q9HBT6 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.49■■□□□ 1.03
CDH20Q9HBT6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH20Q9HBT6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.48■■□□□ 1.03
CDH20Q9HBT6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDH20Q9HBT6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH20Q9HBT6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH20Q9HBT6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH20Q9HBT6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 GPX1-201ENST00000419349 1106 ntBASIC21.46■■□□□ 1.03
CDH20Q9HBT6 AC060814.1-201ENST00000554326 538 ntBASIC21.46■■□□□ 1.03
CDH20Q9HBT6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH20Q9HBT6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH20Q9HBT6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 AL449106.1-201ENST00000608517 1980 ntBASIC21.44■■□□□ 1.02
CDH20Q9HBT6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH20Q9HBT6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDH20Q9HBT6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH20Q9HBT6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH20Q9HBT6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH20Q9HBT6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH20Q9HBT6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH20Q9HBT6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH20Q9HBT6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CDH20Q9HBT6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH20Q9HBT6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH20Q9HBT6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDH20Q9HBT6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDH20Q9HBT6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDH20Q9HBT6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDH20Q9HBT6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH20Q9HBT6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH20Q9HBT6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDH20Q9HBT6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH20Q9HBT6 HSD17B1P1-201ENST00000590052 955 ntBASIC21.37■■□□□ 1.01
CDH20Q9HBT6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms