Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 AL033527.3-201ENST00000566366 1196 ntBASIC21■□□□□ 0.95
RAB1BQ9H0U4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB1BQ9H0U4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB1BQ9H0U4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 TSPY13P-201ENST00000338964 914 ntBASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB1BQ9H0U4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 WHAMMP3-201ENST00000611636 1609 ntBASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAB1BQ9H0U4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 ATP5G2P3-201ENST00000429083 425 ntBASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 AC009831.1-201ENST00000580420 1582 ntBASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB1BQ9H0U4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 AC004987.1-201ENST00000428627 508 ntBASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 AC026202.3-201ENST00000600805 1127 ntBASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB1BQ9H0U4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 AL592293.1-201ENST00000502889 1188 ntBASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 AC093536.1-201ENST00000569153 554 ntBASIC20.94■□□□□ 0.94
RAB1BQ9H0U4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB1BQ9H0U4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB1BQ9H0U4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.93■□□□□ 0.94
RAB1BQ9H0U4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB1BQ9H0U4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB1BQ9H0U4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB1BQ9H0U4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 DRD5P2-201ENST00000421395 2012 ntBASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 AC129492.7-201ENST00000622992 756 ntBASIC20.91■□□□□ 0.94
RAB1BQ9H0U4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB1BQ9H0U4 AC139426.1-201ENST00000568218 2529 ntBASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 AL359504.2-201ENST00000605506 1601 ntBASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB1BQ9H0U4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB1BQ9H0U4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB1BQ9H0U4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAB1BQ9H0U4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RAB1BQ9H0U4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB1BQ9H0U4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms