Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NKX6-1P78426 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX6-1P78426 RARRES2P1-201ENST00000474487 481 ntBASIC21.63■■□□□ 1.05
NKX6-1P78426 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX6-1P78426 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX6-1P78426 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.63■■□□□ 1.05
NKX6-1P78426 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NKX6-1P78426 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX6-1P78426 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NKX6-1P78426 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX6-1P78426 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX6-1P78426 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX6-1P78426 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NKX6-1P78426 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.62■■□□□ 1.05
NKX6-1P78426 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
NKX6-1P78426 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX6-1P78426 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX6-1P78426 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NKX6-1P78426 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NKX6-1P78426 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NKX6-1P78426 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.6■■□□□ 1.05
NKX6-1P78426 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX6-1P78426 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.59■■□□□ 1.05
NKX6-1P78426 AC092296.2-201ENST00000589470 999 ntBASIC21.59■■□□□ 1.05
NKX6-1P78426 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.59■■□□□ 1.05
NKX6-1P78426 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX6-1P78426 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX6-1P78426 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NKX6-1P78426 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX6-1P78426 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.58■■□□□ 1.05
NKX6-1P78426 ECEL1P2-201ENST00000461596 1295 ntBASIC21.58■■□□□ 1.05
NKX6-1P78426 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX6-1P78426 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NKX6-1P78426 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NKX6-1P78426 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.57■■□□□ 1.04
NKX6-1P78426 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.57■■□□□ 1.04
NKX6-1P78426 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.57■■□□□ 1.04
NKX6-1P78426 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.57■■□□□ 1.04
NKX6-1P78426 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX6-1P78426 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX6-1P78426 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NKX6-1P78426 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.56■■□□□ 1.04
NKX6-1P78426 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NKX6-1P78426 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.56■■□□□ 1.04
NKX6-1P78426 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
NKX6-1P78426 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX6-1P78426 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX6-1P78426 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NKX6-1P78426 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NKX6-1P78426 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.55■■□□□ 1.04
NKX6-1P78426 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX6-1P78426 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX6-1P78426 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX6-1P78426 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX6-1P78426 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX6-1P78426 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX6-1P78426 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX6-1P78426 AC126177.7-201ENST00000547904 679 ntBASIC21.53■■□□□ 1.04
NKX6-1P78426 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.53■■□□□ 1.04
NKX6-1P78426 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NKX6-1P78426 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX6-1P78426 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX6-1P78426 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX6-1P78426 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NKX6-1P78426 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX6-1P78426 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX6-1P78426 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NKX6-1P78426 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.52■■□□□ 1.03
NKX6-1P78426 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.51■■□□□ 1.03
NKX6-1P78426 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NKX6-1P78426 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NKX6-1P78426 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NKX6-1P78426 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NKX6-1P78426 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX6-1P78426 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX6-1P78426 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX6-1P78426 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.5■■□□□ 1.03
NKX6-1P78426 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NKX6-1P78426 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NKX6-1P78426 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX6-1P78426 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX6-1P78426 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NKX6-1P78426 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.49■■□□□ 1.03
NKX6-1P78426 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX6-1P78426 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX6-1P78426 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NKX6-1P78426 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX6-1P78426 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX6-1P78426 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX6-1P78426 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
NKX6-1P78426 AC135731.1-201ENST00000569415 2548 ntBASIC21.48■■□□□ 1.03
NKX6-1P78426 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.47■■□□□ 1.03
NKX6-1P78426 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX6-1P78426 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX6-1P78426 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NKX6-1P78426 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX6-1P78426 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX6-1P78426 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.46■■□□□ 1.03
NKX6-1P78426 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX6-1P78426 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms