Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
SMOQ99835 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMOQ99835 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMOQ99835 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.44■■□□□ 1.82
SMOQ99835 AC022413.1-201ENST00000624602 984 ntBASIC26.44■■□□□ 1.82
SMOQ99835 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SMOQ99835 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMOQ99835 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMOQ99835 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMOQ99835 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.43■■□□□ 1.82
SMOQ99835 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.43■■□□□ 1.82
SMOQ99835 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.43■■□□□ 1.82
SMOQ99835 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SMOQ99835 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMOQ99835 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMOQ99835 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SMOQ99835 AC060814.1-201ENST00000554326 538 ntBASIC26.41■■□□□ 1.82
SMOQ99835 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SMOQ99835 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMOQ99835 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMOQ99835 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.4■■□□□ 1.82
SMOQ99835 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMOQ99835 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SMOQ99835 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.39■■□□□ 1.82
SMOQ99835 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SMOQ99835 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMOQ99835 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.39■■□□□ 1.82
SMOQ99835 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMOQ99835 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.39■■□□□ 1.82
SMOQ99835 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SMOQ99835 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.38■■□□□ 1.81
SMOQ99835 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMOQ99835 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SMOQ99835 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMOQ99835 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMOQ99835 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMOQ99835 AC142086.6-201ENST00000621154 1765 ntBASIC26.38■■□□□ 1.81
SMOQ99835 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.37■■□□□ 1.81
SMOQ99835 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.37■■□□□ 1.81
SMOQ99835 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.37■■□□□ 1.81
SMOQ99835 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.37■■□□□ 1.81
SMOQ99835 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SMOQ99835 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMOQ99835 LINC01003-201ENST00000564834 1764 ntBASIC26.36■■□□□ 1.81
SMOQ99835 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMOQ99835 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMOQ99835 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMOQ99835 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.35■■□□□ 1.81
SMOQ99835 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMOQ99835 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMOQ99835 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMOQ99835 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.34■■□□□ 1.81
SMOQ99835 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SMOQ99835 AL359258.2-201ENST00000564063 1566 ntBASIC26.33■■□□□ 1.8
SMOQ99835 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.32■■□□□ 1.8
SMOQ99835 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.32■■□□□ 1.8
SMOQ99835 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMOQ99835 AC126177.7-201ENST00000547904 679 ntBASIC26.32■■□□□ 1.8
SMOQ99835 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.32■■□□□ 1.8
SMOQ99835 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMOQ99835 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMOQ99835 RNF126P1-201ENST00000567452 1320 ntBASIC26.31■■□□□ 1.8
SMOQ99835 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMOQ99835 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMOQ99835 AC092296.2-201ENST00000589470 999 ntBASIC26.29■■□□□ 1.8
SMOQ99835 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMOQ99835 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMOQ99835 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.28■■□□□ 1.8
SMOQ99835 BX255925.1-201ENST00000566954 1854 ntBASIC26.28■■□□□ 1.8
SMOQ99835 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMOQ99835 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMOQ99835 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SMOQ99835 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMOQ99835 RARRES2P2-201ENST00000394842 485 ntBASIC26.27■■□□□ 1.8
SMOQ99835 AL157400.5-201ENST00000507624 621 ntBASIC26.27■■□□□ 1.8
SMOQ99835 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.27■■□□□ 1.8
SMOQ99835 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMOQ99835 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SMOQ99835 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.26■■□□□ 1.79
SMOQ99835 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMOQ99835 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMOQ99835 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SMOQ99835 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMOQ99835 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMOQ99835 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SMOQ99835 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.24■■□□□ 1.79
SMOQ99835 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.24■■□□□ 1.79
SMOQ99835 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SMOQ99835 WHAMMP3-201ENST00000611636 1609 ntBASIC26.23■■□□□ 1.79
SMOQ99835 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMOQ99835 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMOQ99835 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMOQ99835 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMOQ99835 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.21■■□□□ 1.79
SMOQ99835 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SMOQ99835 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SMOQ99835 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.2■■□□□ 1.78
SMOQ99835 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SMOQ99835 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMOQ99835 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms