Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CFAP44Q96MT7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
CFAP44Q96MT7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
CFAP44Q96MT7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CFAP44Q96MT7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.58■■■□□ 2.81
CFAP44Q96MT7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CFAP44Q96MT7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CFAP44Q96MT7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.56■■■□□ 2.8
CFAP44Q96MT7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
CFAP44Q96MT7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
CFAP44Q96MT7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CFAP44Q96MT7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.55■■■□□ 2.8
CFAP44Q96MT7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CFAP44Q96MT7 GPX1-201ENST00000419349 1106 ntBASIC32.54■■■□□ 2.8
CFAP44Q96MT7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.54■■■□□ 2.8
CFAP44Q96MT7 AC142086.6-201ENST00000621154 1765 ntBASIC32.54■■■□□ 2.8
CFAP44Q96MT7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP44Q96MT7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.54■■■□□ 2.8
CFAP44Q96MT7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.53■■■□□ 2.8
CFAP44Q96MT7 LINC01003-201ENST00000564834 1764 ntBASIC32.53■■■□□ 2.8
CFAP44Q96MT7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.53■■■□□ 2.8
CFAP44Q96MT7 AC060814.1-201ENST00000554326 538 ntBASIC32.53■■■□□ 2.8
CFAP44Q96MT7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.52■■■□□ 2.8
CFAP44Q96MT7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
CFAP44Q96MT7 AC022413.1-201ENST00000624602 984 ntBASIC32.52■■■□□ 2.8
CFAP44Q96MT7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.52■■■□□ 2.8
CFAP44Q96MT7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CFAP44Q96MT7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.51■■■□□ 2.8
CFAP44Q96MT7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
CFAP44Q96MT7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.51■■■□□ 2.79
CFAP44Q96MT7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP44Q96MT7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
CFAP44Q96MT7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP44Q96MT7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP44Q96MT7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP44Q96MT7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP44Q96MT7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP44Q96MT7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
CFAP44Q96MT7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP44Q96MT7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.48■■■□□ 2.79
CFAP44Q96MT7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.48■■■□□ 2.79
CFAP44Q96MT7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP44Q96MT7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.47■■■□□ 2.79
CFAP44Q96MT7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
CFAP44Q96MT7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.46■■■□□ 2.79
CFAP44Q96MT7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP44Q96MT7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP44Q96MT7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP44Q96MT7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP44Q96MT7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC32.45■■■□□ 2.79
CFAP44Q96MT7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CFAP44Q96MT7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP44Q96MT7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP44Q96MT7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP44Q96MT7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP44Q96MT7 AC126177.7-201ENST00000547904 679 ntBASIC32.43■■■□□ 2.78
CFAP44Q96MT7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP44Q96MT7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP44Q96MT7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP44Q96MT7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.42■■■□□ 2.78
CFAP44Q96MT7 BX255925.1-201ENST00000566954 1854 ntBASIC32.42■■■□□ 2.78
CFAP44Q96MT7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.42■■■□□ 2.78
CFAP44Q96MT7 AL359258.2-201ENST00000564063 1566 ntBASIC32.41■■■□□ 2.78
CFAP44Q96MT7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP44Q96MT7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP44Q96MT7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.4■■■□□ 2.78
CFAP44Q96MT7 AC092296.2-201ENST00000589470 999 ntBASIC32.4■■■□□ 2.78
CFAP44Q96MT7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP44Q96MT7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP44Q96MT7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP44Q96MT7 RNF126P1-201ENST00000567452 1320 ntBASIC32.39■■■□□ 2.78
CFAP44Q96MT7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP44Q96MT7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.38■■■□□ 2.77
CFAP44Q96MT7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CFAP44Q96MT7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP44Q96MT7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP44Q96MT7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP44Q96MT7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP44Q96MT7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP44Q96MT7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.35■■■□□ 2.77
CFAP44Q96MT7 AL157400.5-201ENST00000507624 621 ntBASIC32.35■■■□□ 2.77
CFAP44Q96MT7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CFAP44Q96MT7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
CFAP44Q96MT7 WHAMMP3-201ENST00000611636 1609 ntBASIC32.33■■■□□ 2.77
CFAP44Q96MT7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.33■■■□□ 2.77
CFAP44Q96MT7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP44Q96MT7 RARRES2P2-201ENST00000394842 485 ntBASIC32.32■■■□□ 2.76
CFAP44Q96MT7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.32■■■□□ 2.76
CFAP44Q96MT7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP44Q96MT7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.31■■■□□ 2.76
CFAP44Q96MT7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP44Q96MT7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CFAP44Q96MT7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.31■■■□□ 2.76
CFAP44Q96MT7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
CFAP44Q96MT7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms