Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.3■■□□□ 1.48
RAB42Q8N4Z0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAB42Q8N4Z0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.28■■□□□ 1.48
RAB42Q8N4Z0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RAB42Q8N4Z0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.28■■□□□ 1.48
RAB42Q8N4Z0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RAB42Q8N4Z0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RAB42Q8N4Z0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RAB42Q8N4Z0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RAB42Q8N4Z0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RAB42Q8N4Z0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.27■■□□□ 1.48
RAB42Q8N4Z0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 AC126177.7-201ENST00000547904 679 ntBASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RAB42Q8N4Z0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAB42Q8N4Z0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAB42Q8N4Z0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RAB42Q8N4Z0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
RAB42Q8N4Z0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RAB42Q8N4Z0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.24■■□□□ 1.47
RAB42Q8N4Z0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAB42Q8N4Z0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAB42Q8N4Z0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAB42Q8N4Z0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.23■■□□□ 1.47
RAB42Q8N4Z0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RAB42Q8N4Z0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAB42Q8N4Z0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAB42Q8N4Z0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAB42Q8N4Z0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAB42Q8N4Z0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAB42Q8N4Z0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
RAB42Q8N4Z0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAB42Q8N4Z0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAB42Q8N4Z0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAB42Q8N4Z0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.2■■□□□ 1.46
RAB42Q8N4Z0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAB42Q8N4Z0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RAB42Q8N4Z0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAB42Q8N4Z0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RAB42Q8N4Z0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAB42Q8N4Z0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAB42Q8N4Z0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.18■■□□□ 1.46
RAB42Q8N4Z0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RAB42Q8N4Z0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RAB42Q8N4Z0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RAB42Q8N4Z0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAB42Q8N4Z0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.14■■□□□ 1.46
RAB42Q8N4Z0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.14■■□□□ 1.45
RAB42Q8N4Z0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.14■■□□□ 1.45
RAB42Q8N4Z0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.13■■□□□ 1.45
RAB42Q8N4Z0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAB42Q8N4Z0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
RAB42Q8N4Z0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RAB42Q8N4Z0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.13■■□□□ 1.45
RAB42Q8N4Z0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAB42Q8N4Z0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.12■■□□□ 1.45
RAB42Q8N4Z0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.12■■□□□ 1.45
RAB42Q8N4Z0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAB42Q8N4Z0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAB42Q8N4Z0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAB42Q8N4Z0 AL359258.2-201ENST00000564063 1566 ntBASIC24.11■■□□□ 1.45
RAB42Q8N4Z0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RAB42Q8N4Z0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.1■■□□□ 1.45
RAB42Q8N4Z0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.1■■□□□ 1.45
RAB42Q8N4Z0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAB42Q8N4Z0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RAB42Q8N4Z0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.09■■□□□ 1.45
RAB42Q8N4Z0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.09■■□□□ 1.45
RAB42Q8N4Z0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.09■■□□□ 1.45
RAB42Q8N4Z0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAB42Q8N4Z0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RAB42Q8N4Z0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RAB42Q8N4Z0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
RAB42Q8N4Z0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RAB42Q8N4Z0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.07■■□□□ 1.44
RAB42Q8N4Z0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAB42Q8N4Z0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms