Protein–RNA interactions for Protein: Q86SJ6

DSG4, Desmoglein-4, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSG4Q86SJ6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DSG4Q86SJ6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DSG4Q86SJ6 AC139426.1-201ENST00000568218 2529 ntBASIC25.24■■□□□ 1.63
DSG4Q86SJ6 AL359258.2-201ENST00000564063 1566 ntBASIC25.24■■□□□ 1.63
DSG4Q86SJ6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DSG4Q86SJ6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
DSG4Q86SJ6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DSG4Q86SJ6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.23■■□□□ 1.63
DSG4Q86SJ6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DSG4Q86SJ6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
DSG4Q86SJ6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.22■■□□□ 1.63
DSG4Q86SJ6 NTF6A-201ENST00000591175 560 ntBASIC25.22■■□□□ 1.63
DSG4Q86SJ6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DSG4Q86SJ6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
DSG4Q86SJ6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DSG4Q86SJ6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DSG4Q86SJ6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.21■■□□□ 1.63
DSG4Q86SJ6 AC018358.1-201ENST00000631079 1402 ntBASIC25.21■■□□□ 1.63
DSG4Q86SJ6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DSG4Q86SJ6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DSG4Q86SJ6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DSG4Q86SJ6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
DSG4Q86SJ6 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.2■■□□□ 1.62
DSG4Q86SJ6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.2■■□□□ 1.62
DSG4Q86SJ6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
DSG4Q86SJ6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.19■■□□□ 1.62
DSG4Q86SJ6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
DSG4Q86SJ6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DSG4Q86SJ6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.19■■□□□ 1.62
DSG4Q86SJ6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
DSG4Q86SJ6 AL157400.5-201ENST00000507624 621 ntBASIC25.19■■□□□ 1.62
DSG4Q86SJ6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DSG4Q86SJ6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DSG4Q86SJ6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.17■■□□□ 1.62
DSG4Q86SJ6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DSG4Q86SJ6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DSG4Q86SJ6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.16■■□□□ 1.62
DSG4Q86SJ6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
DSG4Q86SJ6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.15■■□□□ 1.62
DSG4Q86SJ6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DSG4Q86SJ6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
DSG4Q86SJ6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
DSG4Q86SJ6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
DSG4Q86SJ6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DSG4Q86SJ6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DSG4Q86SJ6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DSG4Q86SJ6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DSG4Q86SJ6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DSG4Q86SJ6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DSG4Q86SJ6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.11■■□□□ 1.61
DSG4Q86SJ6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.11■■□□□ 1.61
DSG4Q86SJ6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.11■■□□□ 1.61
DSG4Q86SJ6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DSG4Q86SJ6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 SMPD5-203ENST00000639008 1464 ntBASIC25.1■■□□□ 1.61
DSG4Q86SJ6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 AC007029.1-201ENST00000604183 313 ntBASIC25.1■■□□□ 1.61
DSG4Q86SJ6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DSG4Q86SJ6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DSG4Q86SJ6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DSG4Q86SJ6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.09■■□□□ 1.61
DSG4Q86SJ6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DSG4Q86SJ6 AC012354.3-201ENST00000623734 483 ntBASIC25.09■■□□□ 1.61
DSG4Q86SJ6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.09■■□□□ 1.61
DSG4Q86SJ6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.08■■□□□ 1.61
DSG4Q86SJ6 U85056.1-201ENST00000616429 682 ntBASIC25.08■■□□□ 1.61
DSG4Q86SJ6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
DSG4Q86SJ6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DSG4Q86SJ6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DSG4Q86SJ6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
DSG4Q86SJ6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.07■■□□□ 1.6
DSG4Q86SJ6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
DSG4Q86SJ6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DSG4Q86SJ6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
DSG4Q86SJ6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.06■■□□□ 1.6
DSG4Q86SJ6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DSG4Q86SJ6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DSG4Q86SJ6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
DSG4Q86SJ6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DSG4Q86SJ6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DSG4Q86SJ6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DSG4Q86SJ6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
DSG4Q86SJ6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
DSG4Q86SJ6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms