Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D28Q2M2D7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.69■■□□□ 1.06
TBC1D28Q2M2D7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TBC1D28Q2M2D7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D28Q2M2D7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D28Q2M2D7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D28Q2M2D7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D28Q2M2D7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D28Q2M2D7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D28Q2M2D7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D28Q2M2D7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TBC1D28Q2M2D7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TBC1D28Q2M2D7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TBC1D28Q2M2D7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D28Q2M2D7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D28Q2M2D7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D28Q2M2D7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D28Q2M2D7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TBC1D28Q2M2D7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 AC126177.7-201ENST00000547904 679 ntBASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.63■■□□□ 1.05
TBC1D28Q2M2D7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TBC1D28Q2M2D7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.61■■□□□ 1.05
TBC1D28Q2M2D7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TBC1D28Q2M2D7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TBC1D28Q2M2D7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TBC1D28Q2M2D7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.6■■□□□ 1.05
TBC1D28Q2M2D7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TBC1D28Q2M2D7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D28Q2M2D7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TBC1D28Q2M2D7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TBC1D28Q2M2D7 WHAMMP3-201ENST00000611636 1609 ntBASIC21.58■■□□□ 1.04
TBC1D28Q2M2D7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D28Q2M2D7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D28Q2M2D7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TBC1D28Q2M2D7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
TBC1D28Q2M2D7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.55■■□□□ 1.04
TBC1D28Q2M2D7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D28Q2M2D7 AL359258.2-201ENST00000564063 1566 ntBASIC21.54■■□□□ 1.04
TBC1D28Q2M2D7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D28Q2M2D7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TBC1D28Q2M2D7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D28Q2M2D7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D28Q2M2D7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TBC1D28Q2M2D7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D28Q2M2D7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D28Q2M2D7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D28Q2M2D7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D28Q2M2D7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D28Q2M2D7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.52■■□□□ 1.04
TBC1D28Q2M2D7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.52■■□□□ 1.04
TBC1D28Q2M2D7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D28Q2M2D7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
TBC1D28Q2M2D7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D28Q2M2D7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms