Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NPIPB4C9JG80 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPIPB4C9JG80 WHAMMP3-201ENST00000611636 1609 ntBASIC22.2■■□□□ 1.14
NPIPB4C9JG80 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 AC148477.6-201ENST00000623746 465 ntBASIC22.19■■□□□ 1.14
NPIPB4C9JG80 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 AL449106.1-201ENST00000608517 1980 ntBASIC22.19■■□□□ 1.14
NPIPB4C9JG80 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NPIPB4C9JG80 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPIPB4C9JG80 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.17■■□□□ 1.14
NPIPB4C9JG80 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.17■■□□□ 1.14
NPIPB4C9JG80 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPIPB4C9JG80 ABHD17AP4-201ENST00000411545 909 ntBASIC22.16■■□□□ 1.14
NPIPB4C9JG80 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.16■■□□□ 1.14
NPIPB4C9JG80 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.16■■□□□ 1.14
NPIPB4C9JG80 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPIPB4C9JG80 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPIPB4C9JG80 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NPIPB4C9JG80 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPIPB4C9JG80 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
NPIPB4C9JG80 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.14■■□□□ 1.14
NPIPB4C9JG80 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NPIPB4C9JG80 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPIPB4C9JG80 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPIPB4C9JG80 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.14■■□□□ 1.13
NPIPB4C9JG80 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPIPB4C9JG80 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPIPB4C9JG80 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
NPIPB4C9JG80 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NPIPB4C9JG80 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NPIPB4C9JG80 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.13■■□□□ 1.13
NPIPB4C9JG80 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.13■■□□□ 1.13
NPIPB4C9JG80 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NPIPB4C9JG80 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPIPB4C9JG80 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 AC142472.1-201ENST00000612013 1741 ntBASIC22.11■■□□□ 1.13
NPIPB4C9JG80 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
NPIPB4C9JG80 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPIPB4C9JG80 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPIPB4C9JG80 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.1■■□□□ 1.13
NPIPB4C9JG80 CR559946.2-201ENST00000623684 991 ntBASIC22.1■■□□□ 1.13
NPIPB4C9JG80 MIR219A2-201ENST00000608502 1504 ntBASIC22.1■■□□□ 1.13
NPIPB4C9JG80 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPIPB4C9JG80 AP004609.3-201ENST00000610705 1884 ntBASIC22.09■■□□□ 1.13
NPIPB4C9JG80 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
NPIPB4C9JG80 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
NPIPB4C9JG80 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.08■■□□□ 1.13
NPIPB4C9JG80 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NPIPB4C9JG80 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
NPIPB4C9JG80 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
NPIPB4C9JG80 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPIPB4C9JG80 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.06■■□□□ 1.12
NPIPB4C9JG80 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPIPB4C9JG80 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPIPB4C9JG80 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.05■■□□□ 1.12
NPIPB4C9JG80 MIR3648-2-201ENST00000581792 180 ntBASIC22.04■■□□□ 1.12
NPIPB4C9JG80 MIR3648-1-201ENST00000615959 180 ntBASIC22.04■■□□□ 1.12
NPIPB4C9JG80 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms