Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.12■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.11■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 AC148477.6-201ENST00000623746 465 ntBASIC26.11■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.11■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.09■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.08■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SYNJ2BP-COX16A0A087WUM0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.03■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.03■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.02■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.02■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SYNJ2BP-COX16A0A087WUM0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.01■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.01■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.98■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.97■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.96■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SYNJ2BP-COX16A0A087WUM0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.93■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 AL359258.2-201ENST00000564063 1566 ntBASIC25.93■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SYNJ2BP-COX16A0A087WUM0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms