Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSSC4Q9Y5U2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSSC4Q9Y5U2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TSSC4Q9Y5U2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TSSC4Q9Y5U2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.6■□□□□ 0.73
TSSC4Q9Y5U2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSSC4Q9Y5U2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TSSC4Q9Y5U2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.59■□□□□ 0.73
TSSC4Q9Y5U2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.58■□□□□ 0.73
TSSC4Q9Y5U2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TSSC4Q9Y5U2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TSSC4Q9Y5U2 AC100797.4-201ENST00000631653 1827 ntBASIC19.58■□□□□ 0.72
TSSC4Q9Y5U2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.57■□□□□ 0.72
TSSC4Q9Y5U2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TSSC4Q9Y5U2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 NTF6A-201ENST00000591175 560 ntBASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSSC4Q9Y5U2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSSC4Q9Y5U2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSSC4Q9Y5U2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TSSC4Q9Y5U2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSSC4Q9Y5U2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 AC092296.2-201ENST00000589470 999 ntBASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.53■□□□□ 0.72
TSSC4Q9Y5U2 ECEL1P2-201ENST00000461596 1295 ntBASIC19.52■□□□□ 0.72
TSSC4Q9Y5U2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TSSC4Q9Y5U2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSSC4Q9Y5U2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TSSC4Q9Y5U2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.52■□□□□ 0.71
TSSC4Q9Y5U2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSSC4Q9Y5U2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSSC4Q9Y5U2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 AL139393.2-201ENST00000608721 2025 ntBASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.49■□□□□ 0.71
TSSC4Q9Y5U2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 AC012354.3-201ENST00000623734 483 ntBASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 AC135731.1-201ENST00000569415 2548 ntBASIC19.48■□□□□ 0.71
TSSC4Q9Y5U2 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.47■□□□□ 0.71
TSSC4Q9Y5U2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSSC4Q9Y5U2 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.47■□□□□ 0.71
TSSC4Q9Y5U2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.47■□□□□ 0.71
TSSC4Q9Y5U2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.46■□□□□ 0.71
TSSC4Q9Y5U2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSSC4Q9Y5U2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSSC4Q9Y5U2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSSC4Q9Y5U2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSSC4Q9Y5U2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSSC4Q9Y5U2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSSC4Q9Y5U2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TSSC4Q9Y5U2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.45■□□□□ 0.7
TSSC4Q9Y5U2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.45■□□□□ 0.7
TSSC4Q9Y5U2 ABCB10P3-201ENST00000561950 2166 ntBASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.44■□□□□ 0.7
TSSC4Q9Y5U2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.43■□□□□ 0.7
TSSC4Q9Y5U2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms