Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDX1P52945 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDX1P52945 U85056.1-201ENST00000616429 682 ntBASIC24.48■■□□□ 1.51
PDX1P52945 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PDX1P52945 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDX1P52945 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.47■■□□□ 1.51
PDX1P52945 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDX1P52945 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PDX1P52945 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
PDX1P52945 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
PDX1P52945 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDX1P52945 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDX1P52945 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.46■■□□□ 1.51
PDX1P52945 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PDX1P52945 AC018358.1-201ENST00000631079 1402 ntBASIC24.45■■□□□ 1.51
PDX1P52945 AC092296.2-201ENST00000589470 999 ntBASIC24.45■■□□□ 1.5
PDX1P52945 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PDX1P52945 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PDX1P52945 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.45■■□□□ 1.5
PDX1P52945 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDX1P52945 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDX1P52945 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.44■■□□□ 1.5
PDX1P52945 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.44■■□□□ 1.5
PDX1P52945 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PDX1P52945 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.43■■□□□ 1.5
PDX1P52945 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PDX1P52945 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.43■■□□□ 1.5
PDX1P52945 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.42■■□□□ 1.5
PDX1P52945 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.42■■□□□ 1.5
PDX1P52945 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
PDX1P52945 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.41■■□□□ 1.5
PDX1P52945 AL033527.3-201ENST00000566366 1196 ntBASIC24.41■■□□□ 1.5
PDX1P52945 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PDX1P52945 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
PDX1P52945 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PDX1P52945 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
PDX1P52945 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.37■■□□□ 1.49
PDX1P52945 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDX1P52945 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDX1P52945 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDX1P52945 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PDX1P52945 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.36■■□□□ 1.49
PDX1P52945 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDX1P52945 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDX1P52945 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDX1P52945 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PDX1P52945 KRT18P60-201ENST00000312876 1297 ntBASIC24.34■■□□□ 1.49
PDX1P52945 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.33■■□□□ 1.49
PDX1P52945 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.33■■□□□ 1.49
PDX1P52945 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.33■■□□□ 1.48
PDX1P52945 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.32■■□□□ 1.48
PDX1P52945 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
PDX1P52945 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 ECEL1P2-201ENST00000461596 1295 ntBASIC24.32■■□□□ 1.48
PDX1P52945 AL157400.5-201ENST00000507624 621 ntBASIC24.32■■□□□ 1.48
PDX1P52945 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.31■■□□□ 1.48
PDX1P52945 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.3■■□□□ 1.48
PDX1P52945 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.3■■□□□ 1.48
PDX1P52945 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms