RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W TY1A-ML1Q04706 440 aaKnown RBP8.39□□□□□ -1.07
SCD6YPR129W TY1A-BRQ12217 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-NL2Q12470 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-GR2Q12485 440 aa8.39□□□□□ -1.07
SCD6YPR129W SPT16P32558 1035 aaKnown RBP8.38□□□□□ -1.07
SCD6YPR129W CST6P40535 587 aa8.38□□□□□ -1.07
SCD6YPR129W SEC2P17065 759 aa8.37□□□□□ -1.07
SCD6YPR129W RGR1P19263 1082 aa8.35□□□□□ -1.07
SCD6YPR129W LAM6Q08001 693 aa8.35□□□□□ -1.07
SCD6YPR129W AIR1P40507 360 aaKnown RBP8.34□□□□□ -1.07
SCD6YPR129W BRE2P43132 505 aa8.34□□□□□ -1.07
SCD6YPR129W YPR109WQ06104 294 aa8.34□□□□□ -1.07
SCD6YPR129W CLA4P48562 842 aa8.32□□□□□ -1.08
SCD6YPR129W GCR2Q01722 534 aa8.31□□□□□ -1.08
SCD6YPR129W PAT1P25644 796 aaKnown RBP8.3□□□□□ -1.08
SCD6YPR129W RRN7P40992 514 aa8.3□□□□□ -1.08
SCD6YPR129W YPL062WQ02781 134 aa8.28□□□□□ -1.08
SCD6YPR129W FRK1Q03002 865 aaPredicted RBP8.28□□□□□ -1.08
SCD6YPR129W CDC4P07834 779 aa8.26□□□□□ -1.09
SCD6YPR129W BDP1P46678 594 aa8.26□□□□□ -1.09
SCD6YPR129W CKB1P43639 278 aa8.24□□□□□ -1.09
SCD6YPR129W KEX2P13134 814 aa8.22□□□□□ -1.09
SCD6YPR129W PSE1P32337 1089 aaKnown RBP8.22□□□□□ -1.09
SCD6YPR129W HED1Q03937 162 aa8.21□□□□□ -1.1
SCD6YPR129W PBS2P08018 668 aa8.2□□□□□ -1.1
SCD6YPR129W ERF2Q06551 359 aa8.2□□□□□ -1.1
SCD6YPR129W GAR1P28007 205 aaKnown RBP8.18□□□□□ -1.1
SCD6YPR129W CLB5P30283 435 aa8.17□□□□□ -1.1
SCD6YPR129W GBP2P25555 427 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SCD6YPR129W PAC1P39946 494 aaKnown RBP8.15□□□□□ -1.1
SCD6YPR129W MOD5P07884 428 aa8.14□□□□□ -1.11
SCD6YPR129W AGE1Q04412 482 aa8.12□□□□□ -1.11
SCD6YPR129W MAM3Q12296 706 aa8.12□□□□□ -1.11
SCD6YPR129W MET22P32179 357 aa8.11□□□□□ -1.11
SCD6YPR129W RTF1P53064 558 aa8.11□□□□□ -1.11
SCD6YPR129W ENV9Q08651 330 aa8.11□□□□□ -1.11
SCD6YPR129W TUB4P53378 473 aa8.1□□□□□ -1.11
SCD6YPR129W YNL115CP53925 644 aa8.07□□□□□ -1.12
SCD6YPR129W MET32Q12041 191 aa8.07□□□□□ -1.12
SCD6YPR129W ASH1P34233 588 aa8.06□□□□□ -1.12
SCD6YPR129W DSF2P38213 736 aa8.06□□□□□ -1.12
SCD6YPR129W AFT1P22149 690 aa8.05□□□□□ -1.12
SCD6YPR129W IES2P40154 320 aa8.04□□□□□ -1.12
SCD6YPR129W HST3P53687 447 aa8.04□□□□□ -1.12
SCD6YPR129W YDR444WQ04093 687 aa8.04□□□□□ -1.12
SCD6YPR129W PUS5Q06244 254 aa8.04□□□□□ -1.12
SCD6YPR129W SIT4P20604 311 aa8.03□□□□□ -1.12
SCD6YPR129W TEA1P47988 759 aa8.01□□□□□ -1.13
SCD6YPR129W SAS10Q12136 610 aaPredicted RBP8□□□□□ -1.13
SCD6YPR129W TPD3P31383 635 aa7.99□□□□□ -1.13
SCD6YPR129W NUP42P49686 430 aaKnown RBP7.99□□□□□ -1.13
SCD6YPR129W LCB5Q06147 687 aaKnown RBP7.99□□□□□ -1.13
SCD6YPR129W KXD1P53158 218 aa7.98□□□□□ -1.13
SCD6YPR129W NIS1P53939 407 aa7.97□□□□□ -1.13
SCD6YPR129W RRD1P40454 393 aaKnown RBP7.94□□□□□ -1.14
SCD6YPR129W HXT10P43581 546 aa7.94□□□□□ -1.14
SCD6YPR129W YJR115WP47152 169 aa7.94□□□□□ -1.14
SCD6YPR129W SYH1Q02875 849 aaKnown RBP7.92□□□□□ -1.14
SCD6YPR129W YDL176WQ12027 708 aa7.92□□□□□ -1.14
SCD6YPR129W PDC1P06169 563 aaKnown RBP7.91□□□□□ -1.14
SCD6YPR129W DIT2P21595 489 aa7.9□□□□□ -1.14
SCD6YPR129W MSB3P48566 633 aaPredicted RBP7.9□□□□□ -1.14
SCD6YPR129W SLY41P22215 453 aa7.89□□□□□ -1.15
SCD6YPR129W FPK1P53739 893 aa7.89□□□□□ -1.15
SCD6YPR129W SPB4P25808 606 aaPredicted RBP7.88□□□□□ -1.15
SCD6YPR129W YMR196WQ04336 1088 aa7.88□□□□□ -1.15
SCD6YPR129W ALR1Q08269 859 aa7.86□□□□□ -1.15
SCD6YPR129W DMA1P38823 416 aa7.85□□□□□ -1.15
SCD6YPR129W RPA14P50106 137 aa7.85□□□□□ -1.15
SCD6YPR129W PUS6P53294 404 aa7.84□□□□□ -1.15
SCD6YPR129W UGA3P26370 528 aa7.83□□□□□ -1.16
SCD6YPR129W TBF1Q02457 562 aa7.83□□□□□ -1.16
SCD6YPR129W YPR097WQ06839 1073 aa7.83□□□□□ -1.16
SCD6YPR129W YDL206WQ12424 762 aa7.82□□□□□ -1.16
SCD6YPR129W KIP2P28743 706 aa7.81□□□□□ -1.16
SCD6YPR129W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
SCD6YPR129W PTK2P47116 818 aaKnown RBP7.8□□□□□ -1.16
SCD6YPR129W HST2P53686 357 aa7.8□□□□□ -1.16
SCD6YPR129W TRM1P15565 570 aaKnown RBP7.78□□□□□ -1.16
SCD6YPR129W MRT4P33201 236 aaKnown RBP7.78□□□□□ -1.16
SCD6YPR129W IXR1P33417 597 aa7.78□□□□□ -1.16
SCD6YPR129W SRF1Q12516 437 aa7.78□□□□□ -1.16
SCD6YPR129W RTT106P40161 455 aa7.77□□□□□ -1.17
SCD6YPR129W YLR346CQ06139 101 aa7.77□□□□□ -1.17
SCD6YPR129W SCJ1P25303 377 aa7.76□□□□□ -1.17
SCD6YPR129W ACO2P39533 789 aa7.76□□□□□ -1.17
SCD6YPR129W OPT2Q06593 877 aa7.76□□□□□ -1.17
SCD6YPR129W CAF120P53836 1060 aa7.75□□□□□ -1.17
SCD6YPR129W MMP1Q12372 583 aa7.74□□□□□ -1.17
SCD6YPR129W NUP85P46673 744 aa7.72□□□□□ -1.17
SCD6YPR129W GLN1P32288 370 aaKnown RBP7.71□□□□□ -1.18
SCD6YPR129W GLY1P37303 387 aaKnown RBP7.71□□□□□ -1.18
SCD6YPR129W TYW1Q08960 810 aaKnown RBP7.71□□□□□ -1.18
SCD6YPR129W ATF2P53296 535 aa7.7□□□□□ -1.18
SCD6YPR129W ESS1P22696 170 aa7.66□□□□□ -1.18
SCD6YPR129W VAC17P25591 423 aa7.66□□□□□ -1.18
SCD6YPR129W SCW11P53189 542 aa7.66□□□□□ -1.18
SCD6YPR129W MIP1P15801 1254 aa7.65□□□□□ -1.18
SCD6YPR129W TY1A-BLQ12266 440 aa7.64□□□□□ -1.19
SCD6YPR129W ARG82P07250 355 aa7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms