RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	KIC1	P38692	1080 aa		6.04	□□□□□ -1.44
LYS9	YNR050C	ORC6	P38826	435 aa		6.03	□□□□□ -1.44
LYS9	YNR050C	GCR2	Q01722	534 aa		6.03	□□□□□ -1.44
LYS9	YNR050C	GAR1	P28007	205 aa	Known RBP	6.01	□□□□□ -1.45
LYS9	YNR050C	GCD11	P32481	527 aa	Known RBP	6	□□□□□ -1.45
LYS9	YNR050C	CDC4	P07834	779 aa		5.99	□□□□□ -1.45
LYS9	YNR050C	NPL4	P33755	580 aa		5.99	□□□□□ -1.45
LYS9	YNR050C	IFH1	P39520	1085 aa		5.99	□□□□□ -1.45
LYS9	YNR050C	REF2	P42073	533 aa	Predicted RBP	5.99	□□□□□ -1.45
LYS9	YNR050C	MET22	P32179	357 aa		5.98	□□□□□ -1.45
LYS9	YNR050C	SPT16	P32558	1035 aa	Known RBP	5.98	□□□□□ -1.45
LYS9	YNR050C	FRK1	Q03002	865 aa	Predicted RBP	5.98	□□□□□ -1.45
LYS9	YNR050C	YPR148C	Q06523	435 aa		5.98	□□□□□ -1.45
LYS9	YNR050C	BDP1	P46678	594 aa		5.97	□□□□□ -1.45
LYS9	YNR050C	MVP1	P40959	511 aa	Known RBP	5.96	□□□□□ -1.46
LYS9	YNR050C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.95	□□□□□ -1.46	not detected
LYS9	YNR050C	RRN7	P40992	514 aa		5.94	□□□□□ -1.46
LYS9	YNR050C	HED1	Q03937	162 aa		5.94	□□□□□ -1.46
LYS9	YNR050C	ENV9	Q08651	330 aa		5.94	□□□□□ -1.46
LYS9	YNR050C	YPR109W	Q06104	294 aa		5.92	□□□□□ -1.46
LYS9	YNR050C	COX6	P00427	148 aa		5.91	□□□□□ -1.46
LYS9	YNR050C	RGR1	P19263	1082 aa		5.91	□□□□□ -1.46
LYS9	YNR050C	ERF2	Q06551	359 aa		5.9	□□□□□ -1.47
LYS9	YNR050C	MAK21	Q12176	1025 aa	Known RBP	5.88	□□□□□ -1.47
LYS9	YNR050C	MOD5	P07884	428 aa		5.87	□□□□□ -1.47
LYS9	YNR050C	PAT1	P25644	796 aa	Known RBP	5.87	□□□□□ -1.47
LYS9	YNR050C	YDR444W	Q04093	687 aa		5.87	□□□□□ -1.47
LYS9	YNR050C	YDL176W	Q12027	708 aa		5.87	□□□□□ -1.47
LYS9	YNR050C	MET32	Q12041	191 aa		5.87	□□□□□ -1.47
LYS9	YNR050C	KEX2	P13134	814 aa		5.86	□□□□□ -1.47
LYS9	YNR050C	PAC1	P39946	494 aa	Known RBP	5.84	□□□□□ -1.47
LYS9	YNR050C	LCB5	Q06147	687 aa	Known RBP	5.84	□□□□□ -1.47
LYS9	YNR050C	AFT1	P22149	690 aa		5.83	□□□□□ -1.48
LYS9	YNR050C	ASH1	P34233	588 aa		5.83	□□□□□ -1.48
LYS9	YNR050C	VPS70	P47161	811 aa		5.82	□□□□□ -1.48
LYS9	YNR050C	AGE1	Q04412	482 aa		5.82	□□□□□ -1.48
LYS9	YNR050C	RRD1	P40454	393 aa	Known RBP	5.78	□□□□□ -1.48
LYS9	YNR050C	PUS5	Q06244	254 aa		5.78	□□□□□ -1.48
LYS9	YNR050C	TUB4	P53378	473 aa		5.77	□□□□□ -1.49
LYS9	YNR050C	HST3	P53687	447 aa		5.76	□□□□□ -1.49
LYS9	YNR050C	YJR115W	P47152	169 aa		5.74	□□□□□ -1.49
LYS9	YNR050C	PSE1	P32337	1089 aa	Known RBP	5.74	□□□□□ -1.49
LYS9	YNR050C	RTF1	P53064	558 aa		5.71	□□□□□ -1.5
LYS9	YNR050C	TPD3	P31383	635 aa		5.7	□□□□□ -1.5
LYS9	YNR050C	SIT4	P20604	311 aa		5.69	□□□□□ -1.5
LYS9	YNR050C	CLB5	P30283	435 aa		5.68	□□□□□ -1.5
LYS9	YNR050C	ACO2	P39533	789 aa		5.68	□□□□□ -1.5
LYS9	YNR050C	MSB3	P48566	633 aa	Predicted RBP	5.68	□□□□□ -1.5
LYS9	YNR050C	YNL115C	P53925	644 aa		5.68	□□□□□ -1.5
LYS9	YNR050C	PBS2	P08018	668 aa		5.65	□□□□□ -1.51
LYS9	YNR050C	CAF120	P53836	1060 aa		5.65	□□□□□ -1.51
LYS9	YNR050C	HXT10	P43581	546 aa		5.64	□□□□□ -1.51
LYS9	YNR050C	PDC1	P06169	563 aa	Known RBP	5.63	□□□□□ -1.51
LYS9	YNR050C	KXD1	P53158	218 aa		5.63	□□□□□ -1.51
LYS9	YNR050C	OPT2	Q06593	877 aa		5.63	□□□□□ -1.51
LYS9	YNR050C	SYH1	Q02875	849 aa	Known RBP	5.62	□□□□□ -1.51
LYS9	YNR050C	MTC5	Q03897	1148 aa		5.62	□□□□□ -1.51
LYS9	YNR050C	PTK2	P47116	818 aa	Known RBP	5.61	□□□□□ -1.51
LYS9	YNR050C	CKB1	P43639	278 aa		5.6	□□□□□ -1.51
LYS9	YNR050C	NIS1	P53939	407 aa		5.6	□□□□□ -1.51
LYS9	YNR050C	TRK2	P28584	889 aa		5.58	□□□□□ -1.52
LYS9	YNR050C	UGA3	P26370	528 aa		5.57	□□□□□ -1.52
LYS9	YNR050C	GLY1	P37303	387 aa	Known RBP	5.57	□□□□□ -1.52
LYS9	YNR050C	MAM3	Q12296	706 aa		5.57	□□□□□ -1.52
LYS9	YNR050C	MRT4	P33201	236 aa	Known RBP	5.56	□□□□□ -1.52
LYS9	YNR050C	TEA1	P47988	759 aa		5.56	□□□□□ -1.52
LYS9	YNR050C	YIR007W	P40566	764 aa		5.55	□□□□□ -1.52
LYS9	YNR050C	DSF2	P38213	736 aa		5.54	□□□□□ -1.52
LYS9	YNR050C	IES2	P40154	320 aa		5.54	□□□□□ -1.52
LYS9	YNR050C	NUP85	P46673	744 aa		5.54	□□□□□ -1.52
LYS9	YNR050C	NUP42	P49686	430 aa	Known RBP	5.54	□□□□□ -1.52
LYS9	YNR050C	YGR035C	P53222	116 aa		5.54	□□□□□ -1.52
LYS9	YNR050C	YLR346C	Q06139	101 aa		5.54	□□□□□ -1.52
LYS9	YNR050C	RPA14	P50106	137 aa		5.53	□□□□□ -1.52
LYS9	YNR050C	HPF1	Q05164	967 aa		5.53	□□□□□ -1.52
LYS9	YNR050C	TY1A-BL	Q12266	440 aa		5.53	□□□□□ -1.52
LYS9	YNR050C	SLY41	P22215	453 aa		5.52	□□□□□ -1.53
LYS9	YNR050C	FPK1	P53739	893 aa		5.52	□□□□□ -1.53
LYS9	YNR050C	YPR097W	Q06839	1073 aa		5.52	□□□□□ -1.53
LYS9	YNR050C	SRF1	Q12516	437 aa		5.52	□□□□□ -1.53
LYS9	YNR050C	ALR1	Q08269	859 aa		5.51	□□□□□ -1.53
LYS9	YNR050C	KIP2	P28743	706 aa		5.5	□□□□□ -1.53
LYS9	YNR050C	SCW11	P53189	542 aa		5.5	□□□□□ -1.53
LYS9	YNR050C	YDL206W	Q12424	762 aa		5.5	□□□□□ -1.53
LYS9	YNR050C	PUS6	P53294	404 aa		5.49	□□□□□ -1.53
LYS9	YNR050C	TYW1	Q08960	810 aa	Known RBP	5.49	□□□□□ -1.53
LYS9	YNR050C	IXR1	P33417	597 aa		5.48	□□□□□ -1.53
LYS9	YNR050C	RTT106	P40161	455 aa		5.48	□□□□□ -1.53
LYS9	YNR050C	MIP1	P15801	1254 aa		5.48	□□□□□ -1.53
LYS9	YNR050C	DIT2	P21595	489 aa		5.47	□□□□□ -1.53
LYS9	YNR050C	TRM1	P15565	570 aa	Known RBP	5.45	□□□□□ -1.54
LYS9	YNR050C	SCJ1	P25303	377 aa		5.45	□□□□□ -1.54
LYS9	YNR050C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
LYS9	YNR050C	AAD14	P42884	376 aa		5.45	□□□□□ -1.54
LYS9	YNR050C	TBF1	Q02457	562 aa		5.44	□□□□□ -1.54
LYS9	YNR050C	YMR196W	Q04336	1088 aa		5.44	□□□□□ -1.54
LYS9	YNR050C	YBL086C	P38177	466 aa		5.43	□□□□□ -1.54
LYS9	YNR050C	HST2	P53686	357 aa		5.43	□□□□□ -1.54
LYS9	YNR050C	VAC17	P25591	423 aa		5.42	□□□□□ -1.54
LYS9	YNR050C	YJR098C	P47139	656 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms