RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W TUM1Q08686 304 aaKnown RBP2.7□□□□□ -1.98
SEC21YNL287W CST6P40535 587 aa2.69□□□□□ -1.98
SEC21YNL287W LAM6Q08001 693 aa2.69□□□□□ -1.98
SEC21YNL287W VPS70P47161 811 aa2.69□□□□□ -1.98
SEC21YNL287W PEX21P50091 288 aa2.69□□□□□ -1.98
SEC21YNL287W CLA4P48562 842 aa2.67□□□□□ -1.98
SEC21YNL287W YPR109WQ06104 294 aa2.67□□□□□ -1.98
SEC21YNL287W PSE1P32337 1089 aaKnown RBP2.66□□□□□ -1.98
SEC21YNL287W SAS10Q12136 610 aaPredicted RBP2.66□□□□□ -1.98
SEC21YNL287W MOD5P07884 428 aa2.66□□□□□ -1.98
SEC21YNL287W AIR1P40507 360 aaKnown RBP2.66□□□□□ -1.98
SEC21YNL287W CKB1P43639 278 aa2.66□□□□□ -1.98
SEC21YNL287W AGE1Q04412 482 aa2.66□□□□□ -1.98
SEC21YNL287W ERG12P07277 443 aa2.65□□□□□ -1.98
SEC21YNL287W NPL4P33755 580 aa2.64□□□□□ -1.99
SEC21YNL287W YPL062WQ02781 134 aa2.64□□□□□ -1.99
SEC21YNL287W CDC4P07834 779 aa2.64□□□□□ -1.99
SEC21YNL287W GCD11P32481 527 aaKnown RBP2.64□□□□□ -1.99
SEC21YNL287W DSF2P38213 736 aa2.64□□□□□ -1.99
SEC21YNL287W BRE2P43132 505 aa2.64□□□□□ -1.99
SEC21YNL287W BDP1P46678 594 aa2.64□□□□□ -1.99
SEC21YNL287W ERF2Q06551 359 aa2.64□□□□□ -1.99
SEC21YNL287W PBS2P08018 668 aa2.64□□□□□ -1.99
SEC21YNL287W SIT4P20604 311 aa2.63□□□□□ -1.99
SEC21YNL287W RRN7P40992 514 aa2.63□□□□□ -1.99
SEC21YNL287W RTF1P53064 558 aa2.63□□□□□ -1.99
SEC21YNL287W HED1Q03937 162 aa2.63□□□□□ -1.99
SEC21YNL287W CLB5P30283 435 aa2.63□□□□□ -1.99
SEC21YNL287W SPT16P32558 1035 aaKnown RBP2.63□□□□□ -1.99
SEC21YNL287W KEX2P13134 814 aa2.62□□□□□ -1.99
SEC21YNL287W PAC1P39946 494 aaKnown RBP2.62□□□□□ -1.99
SEC21YNL287W NUP42P49686 430 aaKnown RBP2.62□□□□□ -1.99
SEC21YNL287W TPD3P31383 635 aa2.62□□□□□ -1.99
SEC21YNL287W TUB4P53378 473 aa2.6□□□□□ -1.99
SEC21YNL287W PAT1P25644 796 aaKnown RBP2.6□□□□□ -1.99
SEC21YNL287W FRK1Q03002 865 aaPredicted RBP2.6□□□□□ -1.99
SEC21YNL287W MET32Q12041 191 aa2.6□□□□□ -1.99
SEC21YNL287W MAM3Q12296 706 aa2.6□□□□□ -1.99
SEC21YNL287W ENV9Q08651 330 aa2.6□□□□□ -1.99
SEC21YNL287W MET22P32179 357 aa2.59□□□□□ -1.99
SEC21YNL287W YNL115CP53925 644 aa2.59□□□□□ -1.99
SEC21YNL287W GCR2Q01722 534 aa2.59□□□□□ -1.99
SEC21YNL287W AFT1P22149 690 aa2.59□□□□□ -2
SEC21YNL287W IES2P40154 320 aa2.59□□□□□ -2
SEC21YNL287W NIS1P53939 407 aa2.58□□□□□ -2
SEC21YNL287W YDL176WQ12027 708 aa2.58□□□□□ -2
SEC21YNL287W RRD1P40454 393 aaKnown RBP2.57□□□□□ -2
SEC21YNL287W LCB5Q06147 687 aaKnown RBP2.56□□□□□ -2
SEC21YNL287W DIT2P21595 489 aa2.56□□□□□ -2
SEC21YNL287W TEA1P47988 759 aa2.56□□□□□ -2
SEC21YNL287W PDC1P06169 563 aaKnown RBP2.55□□□□□ -2
SEC21YNL287W ASH1P34233 588 aa2.55□□□□□ -2
SEC21YNL287W HXT10P43581 546 aa2.55□□□□□ -2
SEC21YNL287W MSB3P48566 633 aaPredicted RBP2.55□□□□□ -2
SEC21YNL287W FPK1P53739 893 aa2.55□□□□□ -2
SEC21YNL287W YDR444WQ04093 687 aa2.55□□□□□ -2
SEC21YNL287W PUS5Q06244 254 aa2.55□□□□□ -2
SEC21YNL287W MRT4P33201 236 aaKnown RBP2.54□□□□□ -2
SEC21YNL287W DMA1P38823 416 aa2.54□□□□□ -2
SEC21YNL287W RPA14P50106 137 aa2.54□□□□□ -2
SEC21YNL287W HST2P53686 357 aa2.54□□□□□ -2
SEC21YNL287W GAR1P28007 205 aaKnown RBP2.53□□□□□ -2
SEC21YNL287W KXD1P53158 218 aa2.53□□□□□ -2
SEC21YNL287W YPR097WQ06839 1073 aa2.53□□□□□ -2
SEC21YNL287W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SEC21YNL287W YJR115WP47152 169 aa2.53□□□□□ -2
SEC21YNL287W ACO2P39533 789 aa2.52□□□□□ -2.01
SEC21YNL287W HST3P53687 447 aa2.52□□□□□ -2.01
SEC21YNL287W SYH1Q02875 849 aaKnown RBP2.52□□□□□ -2.01
SEC21YNL287W RTT106P40161 455 aa2.51□□□□□ -2.01
SEC21YNL287W PUS6P53294 404 aa2.51□□□□□ -2.01
SEC21YNL287W SLY41P22215 453 aa2.51□□□□□ -2.01
SEC21YNL287W RSC30P38781 883 aa2.51□□□□□ -2.01
SEC21YNL287W YDL206WQ12424 762 aa2.5□□□□□ -2.01
SEC21YNL287W TRM1P15565 570 aaKnown RBP2.5□□□□□ -2.01
SEC21YNL287W ALR1Q08269 859 aa2.5□□□□□ -2.01
SEC21YNL287W SCJ1P25303 377 aa2.49□□□□□ -2.01
SEC21YNL287W PTK2P47116 818 aaKnown RBP2.49□□□□□ -2.01
SEC21YNL287W YNR021WP53723 404 aaKnown RBP2.49□□□□□ -2.01
SEC21YNL287W VAC17P25591 423 aa2.49□□□□□ -2.01
SEC21YNL287W SPB4P25808 606 aaPredicted RBP2.48□□□□□ -2.01
SEC21YNL287W GLY1P37303 387 aaKnown RBP2.48□□□□□ -2.01
SEC21YNL287W OPT2Q06593 877 aa2.48□□□□□ -2.01
SEC21YNL287W NUP85P46673 744 aa2.48□□□□□ -2.01
SEC21YNL287W YMR196WQ04336 1088 aa2.48□□□□□ -2.01
SEC21YNL287W GBP2P25555 427 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SEC21YNL287W KTR1P27810 393 aaKnown RBP2.47□□□□□ -2.01
SEC21YNL287W YBL086CP38177 466 aa2.47□□□□□ -2.01
SEC21YNL287W MMP1Q12372 583 aa2.47□□□□□ -2.01
SEC21YNL287W GLN1P32288 370 aaKnown RBP2.47□□□□□ -2.01
SEC21YNL287W AIM7Q12156 149 aa2.47□□□□□ -2.01
SEC21YNL287W TBF1Q02457 562 aa2.46□□□□□ -2.01
SEC21YNL287W TY1A-BLQ12266 440 aa2.46□□□□□ -2.01
SEC21YNL287W UGA3P26370 528 aa2.46□□□□□ -2.02
SEC21YNL287W IXR1P33417 597 aa2.46□□□□□ -2.02
SEC21YNL287W EMW1P42842 904 aaKnown RBP2.46□□□□□ -2.02
SEC21YNL287W ESS1P22696 170 aa2.46□□□□□ -2.02
SEC21YNL287W YJU3P28321 313 aa2.46□□□□□ -2.02
SEC21YNL287W CAF120P53836 1060 aa2.46□□□□□ -2.02
SEC21YNL287W KIP2P28743 706 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms