RNA–Protein interactions for RNA: YNL105W

RRT16, Transcript of Dubious open reading frame, yeastyeast

Gene RRT16, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT16YNL105W TY1A-JR2P47099 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-DR1Q03856 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-ML1Q04706 440 aaKnown RBP6.52□□□□□ -1.37
RRT16YNL105W TY1A-BRQ12217 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-NL2Q12470 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-GR2Q12485 440 aa6.52□□□□□ -1.37
RRT16YNL105W SEC2P17065 759 aa6.51□□□□□ -1.37
RRT16YNL105W YPR109WQ06104 294 aa6.51□□□□□ -1.37
RRT16YNL105W SPT16P32558 1035 aaKnown RBP6.5□□□□□ -1.37
RRT16YNL105W CST6P40535 587 aa6.49□□□□□ -1.37
RRT16YNL105W CKB1P43639 278 aa6.48□□□□□ -1.37
RRT16YNL105W PBS2P08018 668 aa6.46□□□□□ -1.38
RRT16YNL105W LAM6Q08001 693 aa6.46□□□□□ -1.38
RRT16YNL105W AIR1P40507 360 aaKnown RBP6.45□□□□□ -1.38
RRT16YNL105W RRN7P40992 514 aa6.45□□□□□ -1.38
RRT16YNL105W PAT1P25644 796 aaKnown RBP6.44□□□□□ -1.38
RRT16YNL105W CLA4P48562 842 aa6.43□□□□□ -1.38
RRT16YNL105W PSE1P32337 1089 aaKnown RBP6.42□□□□□ -1.38
RRT16YNL105W FRK1Q03002 865 aaPredicted RBP6.42□□□□□ -1.38
RRT16YNL105W KEX2P13134 814 aa6.41□□□□□ -1.38
RRT16YNL105W BDP1P46678 594 aa6.41□□□□□ -1.38
RRT16YNL105W BRE2P43132 505 aa6.4□□□□□ -1.38
RRT16YNL105W ERF2Q06551 359 aa6.4□□□□□ -1.38
RRT16YNL105W MAM3Q12296 706 aa6.39□□□□□ -1.39
RRT16YNL105W GAR1P28007 205 aaKnown RBP6.38□□□□□ -1.39
RRT16YNL105W GCR2Q01722 534 aa6.38□□□□□ -1.39
RRT16YNL105W CLB5P30283 435 aa6.37□□□□□ -1.39
RRT16YNL105W CDC4P07834 779 aa6.36□□□□□ -1.39
RRT16YNL105W GBP2P25555 427 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
RRT16YNL105W DSF2P38213 736 aa6.35□□□□□ -1.39
RRT16YNL105W HED1Q03937 162 aa6.35□□□□□ -1.39
RRT16YNL105W SAS10Q12136 610 aaPredicted RBP6.35□□□□□ -1.39
RRT16YNL105W PAC1P39946 494 aaKnown RBP6.34□□□□□ -1.39
RRT16YNL105W IES2P40154 320 aa6.33□□□□□ -1.4
RRT16YNL105W DMA1P38823 416 aa6.32□□□□□ -1.4
RRT16YNL105W RTF1P53064 558 aa6.32□□□□□ -1.4
RRT16YNL105W TUB4P53378 473 aa6.32□□□□□ -1.4
RRT16YNL105W AGE1Q04412 482 aa6.32□□□□□ -1.4
RRT16YNL105W MOD5P07884 428 aa6.31□□□□□ -1.4
RRT16YNL105W TEA1P47988 759 aa6.29□□□□□ -1.4
RRT16YNL105W NUP42P49686 430 aaKnown RBP6.29□□□□□ -1.4
RRT16YNL105W YNL115CP53925 644 aa6.29□□□□□ -1.4
RRT16YNL105W SIT4P20604 311 aa6.28□□□□□ -1.4
RRT16YNL105W SPB4P25808 606 aaPredicted RBP6.26□□□□□ -1.41
RRT16YNL105W NIS1P53939 407 aa6.25□□□□□ -1.41
RRT16YNL105W PUS5Q06244 254 aa6.25□□□□□ -1.41
RRT16YNL105W MET32Q12041 191 aa6.25□□□□□ -1.41
RRT16YNL105W ASH1P34233 588 aa6.24□□□□□ -1.41
RRT16YNL105W DIT2P21595 489 aa6.23□□□□□ -1.41
RRT16YNL105W MET22P32179 357 aa6.23□□□□□ -1.41
RRT16YNL105W AFT1P22149 690 aa6.22□□□□□ -1.41
RRT16YNL105W KXD1P53158 218 aa6.22□□□□□ -1.41
RRT16YNL105W ENV9Q08651 330 aa6.22□□□□□ -1.41
RRT16YNL105W HST3P53687 447 aa6.21□□□□□ -1.42
RRT16YNL105W RQC2Q12532 1038 aaKnown RBP6.21□□□□□ -1.42
RRT16YNL105W TPD3P31383 635 aa6.2□□□□□ -1.42
RRT16YNL105W SLY41P22215 453 aa6.19□□□□□ -1.42
RRT16YNL105W HXT10P43581 546 aa6.19□□□□□ -1.42
RRT16YNL105W FPK1P53739 893 aa6.19□□□□□ -1.42
RRT16YNL105W RRD1P40454 393 aaKnown RBP6.18□□□□□ -1.42
RRT16YNL105W YDR444WQ04093 687 aa6.18□□□□□ -1.42
RRT16YNL105W YMR196WQ04336 1088 aa6.18□□□□□ -1.42
RRT16YNL105W PDC1P06169 563 aaKnown RBP6.17□□□□□ -1.42
RRT16YNL105W SYH1Q02875 849 aaKnown RBP6.15□□□□□ -1.42
RRT16YNL105W LCB5Q06147 687 aaKnown RBP6.15□□□□□ -1.42
RRT16YNL105W YJR115WP47152 169 aa6.14□□□□□ -1.43
RRT16YNL105W PUS6P53294 404 aa6.13□□□□□ -1.43
RRT16YNL105W ALR1Q08269 859 aa6.13□□□□□ -1.43
RRT16YNL105W RPA14P50106 137 aa6.12□□□□□ -1.43
RRT16YNL105W TBF1Q02457 562 aa6.12□□□□□ -1.43
RRT16YNL105W YDL206WQ12424 762 aa6.12□□□□□ -1.43
RRT16YNL105W SCJ1P25303 377 aa6.11□□□□□ -1.43
RRT16YNL105W MSB3P48566 633 aaPredicted RBP6.11□□□□□ -1.43
RRT16YNL105W HST2P53686 357 aa6.11□□□□□ -1.43
RRT16YNL105W YPR097WQ06839 1073 aa6.11□□□□□ -1.43
RRT16YNL105W TRM1P15565 570 aaKnown RBP6.09□□□□□ -1.43
RRT16YNL105W KIP2P28743 706 aa6.09□□□□□ -1.43
RRT16YNL105W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RRT16YNL105W ATF2P53296 535 aa6.09□□□□□ -1.43
RRT16YNL105W YDL176WQ12027 708 aa6.08□□□□□ -1.44
RRT16YNL105W MMP1Q12372 583 aa6.08□□□□□ -1.44
RRT16YNL105W UGA3P26370 528 aa6.07□□□□□ -1.44
RRT16YNL105W GLN1P32288 370 aaKnown RBP6.06□□□□□ -1.44
RRT16YNL105W IXR1P33417 597 aa6.05□□□□□ -1.44
RRT16YNL105W MRT4P33201 236 aaKnown RBP6.04□□□□□ -1.44
RRT16YNL105W PTK2P47116 818 aaKnown RBP6.04□□□□□ -1.44
RRT16YNL105W ESS1P22696 170 aa6.03□□□□□ -1.44
RRT16YNL105W YNR021WP53723 404 aaKnown RBP6.03□□□□□ -1.44
RRT16YNL105W SRF1Q12516 437 aa6.03□□□□□ -1.44
RRT16YNL105W GLC3P32775 704 aa6.02□□□□□ -1.45
RRT16YNL105W YJU3P28321 313 aa6□□□□□ -1.45
RRT16YNL105W RTT106P40161 455 aa6□□□□□ -1.45
RRT16YNL105W YLR346CQ06139 101 aa6□□□□□ -1.45
RRT16YNL105W OPT2Q06593 877 aa6□□□□□ -1.45
RRT16YNL105W TYW1Q08960 810 aaKnown RBP6□□□□□ -1.45
RRT16YNL105W VAC17P25591 423 aa5.98□□□□□ -1.45
RRT16YNL105W ACO2P39533 789 aa5.98□□□□□ -1.45
RRT16YNL105W CAF120P53836 1060 aa5.98□□□□□ -1.45
RRT16YNL105W RSC30P38781 883 aa5.97□□□□□ -1.45
RRT16YNL105W NUP85P46673 744 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms