RNA–Protein interactions for RNA: YNL105W

RRT16, Transcript of Dubious open reading frame, yeastyeast

Gene RRT16, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT16YNL105W MTC1P47018 478 aaKnown RBP12.65□□□□□ -0.38
RRT16YNL105W FAP1P53971 965 aa12.45□□□□□ -0.42
RRT16YNL105W PRY3P47033 881 aa11.75□□□□□ -0.53
RRT16YNL105W DRS1P32892 752 aaKnown RBP11.59□□□□□ -0.55
RRT16YNL105W AAD16Q02895 342 aa11.18□□□□□ -0.62
RRT16YNL105W PRI1P10363 409 aa11.12□□□□□ -0.63
RRT16YNL105W YCK3P39962 524 aa11.04□□□□□ -0.64
RRT16YNL105W HAA1Q12753 694 aaKnown RBP10.91□□□□□ -0.66
RRT16YNL105W ISW2Q08773 1120 aa10.61□□□□□ -0.71
RRT16YNL105W RPG1P38249 964 aaKnown RBP10.54□□□□□ -0.72
RRT16YNL105W TSR3Q12094 313 aaKnown RBP10.49□□□□□ -0.73
RRT16YNL105W DIP2Q12220 943 aaPredicted RBP10.24□□□□□ -0.77
RRT16YNL105W MRPL32P25348 183 aa10.05□□□□□ -0.8
RRT16YNL105W RSE1Q04693 1361 aaKnown RBP9.97□□□□□ -0.81
RRT16YNL105W YGL015CP33199 130 aa9.89□□□□□ -0.83
RRT16YNL105W AVT3P36062 692 aa9.81□□□□□ -0.84
RRT16YNL105W RPL17AP05740 184 aaKnown RBP9.66□□□□□ -0.86
RRT16YNL105W RPL17BP46990 184 aaKnown RBP9.66□□□□□ -0.86
RRT16YNL105W REB1P21538 810 aa9.65□□□□□ -0.86
RRT16YNL105W BUD31P25337 157 aaPredicted RBP9.53□□□□□ -0.88
RRT16YNL105W BFR2Q06631 534 aaKnown RBP9.52□□□□□ -0.89
RRT16YNL105W CDC27P38042 758 aa9.4□□□□□ -0.9
RRT16YNL105W SPT21P35209 758 aa9.23□□□□□ -0.93
RRT16YNL105W MAP2P38174 421 aaKnown RBP9.22□□□□□ -0.93
RRT16YNL105W UBP10P53874 792 aaPredicted RBP9.22□□□□□ -0.93
RRT16YNL105W YKR023WP36119 530 aaKnown RBP9.18□□□□□ -0.94
RRT16YNL105W HOP09932 586 aa8.99□□□□□ -0.97
RRT16YNL105W SIS1P25294 352 aaKnown RBP8.99□□□□□ -0.97
RRT16YNL105W TFC8Q12308 588 aa8.99□□□□□ -0.97
RRT16YNL105W DCD1P06773 312 aa8.97□□□□□ -0.97
RRT16YNL105W RIM101P33400 625 aa8.86□□□□□ -0.99
RRT16YNL105W TIF4632P39936 914 aaKnown RBP8.86□□□□□ -0.99
RRT16YNL105W UBP9P39967 754 aa8.86□□□□□ -0.99
RRT16YNL105W SCY1P53009 804 aa8.86□□□□□ -0.99
RRT16YNL105W TGL3P40308 642 aa8.81□□□□□ -1
RRT16YNL105W SLX5P32828 619 aaKnown RBP8.78□□□□□ -1
RRT16YNL105W BCH2P36122 765 aa8.69□□□□□ -1.02
RRT16YNL105W OXP1P28273 1286 aa8.55□□□□□ -1.04
RRT16YNL105W EPS1P40557 701 aa8.46□□□□□ -1.06
RRT16YNL105W BDF1P35817 686 aa8.44□□□□□ -1.06
RRT16YNL105W PTP3P40048 928 aa8.44□□□□□ -1.06
RRT16YNL105W YIL055CP40523 627 aaKnown RBP8.44□□□□□ -1.06
RRT16YNL105W YBL029C-AQ3E756 94 aa8.42□□□□□ -1.06
RRT16YNL105W MST1P07236 462 aa8.32□□□□□ -1.08
RRT16YNL105W RSM7P47150 247 aa8.31□□□□□ -1.08
RRT16YNL105W BBC1P47068 1157 aa8.28□□□□□ -1.08
RRT16YNL105W YAH1Q12184 172 aaKnown RBP8.27□□□□□ -1.09
RRT16YNL105W TFA1P36100 482 aa8.26□□□□□ -1.09
RRT16YNL105W YOR238WQ08634 303 aa8.26□□□□□ -1.09
RRT16YNL105W AI2P03876 854 aa8.25□□□□□ -1.09
RRT16YNL105W VNX1P42839 908 aa8.24□□□□□ -1.09
RRT16YNL105W NSR1P27476 414 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RRT16YNL105W SPP1Q03012 353 aa8.18□□□□□ -1.1
RRT16YNL105W WSC3Q12215 556 aa8.14□□□□□ -1.11
RRT16YNL105W YAP5P40574 245 aa8.13□□□□□ -1.11
RRT16YNL105W YLR271WQ06152 274 aa8.12□□□□□ -1.11
RRT16YNL105W AIR2Q12476 344 aaKnown RBP8.1□□□□□ -1.11
RRT16YNL105W YJL171CP46992 396 aa8.08□□□□□ -1.12
RRT16YNL105W FKH1P40466 484 aa8.06□□□□□ -1.12
RRT16YNL105W PSD2P53037 1138 aaKnown RBP8.03□□□□□ -1.12
RRT16YNL105W TIF11P38912 153 aaKnown RBP8.01□□□□□ -1.13
RRT16YNL105W SSP1P38871 571 aa7.97□□□□□ -1.13
RRT16YNL105W GTT3P39996 337 aa7.95□□□□□ -1.14
RRT16YNL105W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
RRT16YNL105W MRM1P25270 412 aa7.94□□□□□ -1.14
RRT16YNL105W LDB19Q12502 818 aa7.93□□□□□ -1.14
RRT16YNL105W PIB1Q06651 286 aa7.89□□□□□ -1.15
RRT16YNL105W BMT6Q12291 365 aa7.89□□□□□ -1.15
RRT16YNL105W ULI1P43604 169 aa7.86□□□□□ -1.15
RRT16YNL105W IOC2Q12072 812 aa7.84□□□□□ -1.15
RRT16YNL105W CST9Q06032 482 aa7.82□□□□□ -1.16
RRT16YNL105W MGA2P40578 1113 aa7.81□□□□□ -1.16
RRT16YNL105W YMR1P47147 688 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
RRT16YNL105W VPS29P38759 282 aa7.77□□□□□ -1.17
RRT16YNL105W RTG3P38165 486 aa7.76□□□□□ -1.17
RRT16YNL105W MSB4Q12317 492 aa7.76□□□□□ -1.17
RRT16YNL105W DBP1P24784 617 aaKnown RBP7.74□□□□□ -1.17
RRT16YNL105W EAP1P36041 632 aaKnown RBP7.72□□□□□ -1.17
RRT16YNL105W YFR006WP43590 535 aa7.71□□□□□ -1.18
RRT16YNL105W YOL036WQ08206 761 aa7.71□□□□□ -1.18
RRT16YNL105W SET4P42948 560 aa7.7□□□□□ -1.18
RRT16YNL105W STS1P38637 319 aa7.69□□□□□ -1.18
RRT16YNL105W VMA1P17255 1071 aaKnown RBP7.68□□□□□ -1.18
RRT16YNL105W RTG1P32607 177 aa7.68□□□□□ -1.18
RRT16YNL105W RCR1P38212 213 aa7.66□□□□□ -1.18
RRT16YNL105W TRP5P00931 707 aaKnown RBP7.65□□□□□ -1.18
RRT16YNL105W SAM3Q08986 587 aa7.64□□□□□ -1.19
RRT16YNL105W NCR1Q12200 1170 aa7.62□□□□□ -1.19
RRT16YNL105W YNL035CP53962 389 aaKnown RBP7.59□□□□□ -1.19
RRT16YNL105W SEC61P32915 480 aa7.56□□□□□ -1.2
RRT16YNL105W ABP1P15891 592 aaKnown RBP7.52□□□□□ -1.21
RRT16YNL105W GYP5Q12344 894 aa7.52□□□□□ -1.21
RRT16YNL105W BCK2P33306 851 aa7.48□□□□□ -1.21
RRT16YNL105W TFG1P41895 735 aaPredicted RBP7.48□□□□□ -1.21
RRT16YNL105W JIP4Q03361 876 aa7.48□□□□□ -1.21
RRT16YNL105W DAN4P47179 1161 aa7.47□□□□□ -1.21
RRT16YNL105W HTA1P04911 132 aaKnown RBP7.46□□□□□ -1.22
RRT16YNL105W HTA2P04912 132 aa7.46□□□□□ -1.22
RRT16YNL105W SAP30P38429 201 aa7.46□□□□□ -1.22
RRT16YNL105W DCW1P36091 449 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms