RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W TY1A-ML1Q04706 440 aaKnown RBP5.18□□□□□ -1.58
MVP1YMR004W TY1A-BRQ12217 440 aa5.18□□□□□ -1.58
MVP1YMR004W TY1A-NL2Q12470 440 aa5.18□□□□□ -1.58
MVP1YMR004W TY1A-GR2Q12485 440 aa5.18□□□□□ -1.58
MVP1YMR004W SEC2P17065 759 aa5.18□□□□□ -1.58
MVP1YMR004W SPT16P32558 1035 aaKnown RBP5.18□□□□□ -1.58
MVP1YMR004W ORC6P38826 435 aa5.18□□□□□ -1.58
MVP1YMR004W GBP2P25555 427 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
MVP1YMR004W GCD11P32481 527 aaKnown RBP5.17□□□□□ -1.58
MVP1YMR004W REF2P42073 533 aaPredicted RBP5.17□□□□□ -1.58
MVP1YMR004W CDC4P07834 779 aa5.15□□□□□ -1.58
MVP1YMR004W FRK1Q03002 865 aaPredicted RBP5.15□□□□□ -1.58
MVP1YMR004W YPR148CQ06523 435 aa5.13□□□□□ -1.59
MVP1YMR004W MVP1P40959 511 aaKnown RBP5.13□□□□□ -1.59
MVP1YMR004W BDP1P46678 594 aa5.13□□□□□ -1.59
MVP1YMR004W RRN7P40992 514 aa5.12□□□□□ -1.59
MVP1YMR004W PAT1P25644 796 aaKnown RBP5.11□□□□□ -1.59
MVP1YMR004W MET22P32179 357 aa5.11□□□□□ -1.59
MVP1YMR004W HED1Q03937 162 aa5.1□□□□□ -1.59
MVP1YMR004W COX6P00427 148 aa5.09□□□□□ -1.59
MVP1YMR004W YPR109WQ06104 294 aa5.09□□□□□ -1.59
MVP1YMR004W ENV9Q08651 330 aa5.09□□□□□ -1.59
MVP1YMR004W MAK21Q12176 1025 aaKnown RBP5.09□□□□□ -1.59
MVP1YMR004W RGR1P19263 1082 aa5.07□□□□□ -1.6
MVP1YMR004W YDR444WQ04093 687 aa5.05□□□□□ -1.6
MVP1YMR004W KEX2P13134 814 aa5.03□□□□□ -1.6
MVP1YMR004W VPS70P47161 811 aa5.03□□□□□ -1.6
MVP1YMR004W ERF2Q06551 359 aa5.02□□□□□ -1.61
MVP1YMR004W ASH1P34233 588 aa5.02□□□□□ -1.61
MVP1YMR004W MET32Q12041 191 aa5.02□□□□□ -1.61
MVP1YMR004W MOD5P07884 428 aa5.01□□□□□ -1.61
MVP1YMR004W AFT1P22149 690 aa5.01□□□□□ -1.61
MVP1YMR004W LCB5Q06147 687 aaKnown RBP5.01□□□□□ -1.61
MVP1YMR004W PAC1P39946 494 aaKnown RBP5□□□□□ -1.61
MVP1YMR004W HST3P53687 447 aa4.99□□□□□ -1.61
MVP1YMR004W YDL176WQ12027 708 aa4.99□□□□□ -1.61
MVP1YMR004W AGE1Q04412 482 aa4.97□□□□□ -1.61
MVP1YMR004W PUS5Q06244 254 aa4.97□□□□□ -1.61
MVP1YMR004W RRD1P40454 393 aaKnown RBP4.96□□□□□ -1.62
MVP1YMR004W TUB4P53378 473 aa4.96□□□□□ -1.62
MVP1YMR004W PSE1P32337 1089 aaKnown RBP4.95□□□□□ -1.62
MVP1YMR004W CLB5P30283 435 aa4.93□□□□□ -1.62
MVP1YMR004W YJR115WP47152 169 aa4.93□□□□□ -1.62
MVP1YMR004W RTF1P53064 558 aa4.93□□□□□ -1.62
MVP1YMR004W YNL115CP53925 644 aa4.9□□□□□ -1.63
MVP1YMR004W PBS2P08018 668 aa4.89□□□□□ -1.63
MVP1YMR004W TPD3P31383 635 aa4.89□□□□□ -1.63
MVP1YMR004W MSB3P48566 633 aaPredicted RBP4.89□□□□□ -1.63
MVP1YMR004W KXD1P53158 218 aa4.88□□□□□ -1.63
MVP1YMR004W CKB1P43639 278 aa4.87□□□□□ -1.63
MVP1YMR004W SIT4P20604 311 aa4.87□□□□□ -1.63
MVP1YMR004W ACO2P39533 789 aa4.86□□□□□ -1.63
MVP1YMR004W HXT10P43581 546 aa4.86□□□□□ -1.63
MVP1YMR004W CAF120P53836 1060 aa4.86□□□□□ -1.63
MVP1YMR004W SYH1Q02875 849 aaKnown RBP4.86□□□□□ -1.63
MVP1YMR004W PDC1P06169 563 aaKnown RBP4.83□□□□□ -1.64
MVP1YMR004W MTC5Q03897 1148 aa4.83□□□□□ -1.64
MVP1YMR004W MAM3Q12296 706 aa4.83□□□□□ -1.64
MVP1YMR004W UGA3P26370 528 aa4.82□□□□□ -1.64
MVP1YMR004W PTK2P47116 818 aaKnown RBP4.82□□□□□ -1.64
MVP1YMR004W TEA1P47988 759 aa4.82□□□□□ -1.64
MVP1YMR004W OPT2Q06593 877 aa4.82□□□□□ -1.64
MVP1YMR004W NIS1P53939 407 aa4.82□□□□□ -1.64
MVP1YMR004W YLR346CQ06139 101 aa4.82□□□□□ -1.64
MVP1YMR004W SRF1Q12516 437 aa4.81□□□□□ -1.64
MVP1YMR004W TRK2P28584 889 aa4.79□□□□□ -1.64
MVP1YMR004W GLY1P37303 387 aaKnown RBP4.78□□□□□ -1.64
MVP1YMR004W IES2P40154 320 aa4.78□□□□□ -1.64
MVP1YMR004W YGR035CP53222 116 aa4.78□□□□□ -1.64
MVP1YMR004W SLY41P22215 453 aa4.77□□□□□ -1.65
MVP1YMR004W KIP2P28743 706 aa4.77□□□□□ -1.65
MVP1YMR004W MRT4P33201 236 aaKnown RBP4.77□□□□□ -1.65
MVP1YMR004W DSF2P38213 736 aa4.77□□□□□ -1.65
MVP1YMR004W RTT106P40161 455 aa4.77□□□□□ -1.65
MVP1YMR004W NUP85P46673 744 aa4.77□□□□□ -1.65
MVP1YMR004W NUP42P49686 430 aaKnown RBP4.77□□□□□ -1.65
MVP1YMR004W RPA14P50106 137 aa4.77□□□□□ -1.65
MVP1YMR004W ALR1Q08269 859 aa4.77□□□□□ -1.65
MVP1YMR004W YIR007WP40566 764 aa4.76□□□□□ -1.65
MVP1YMR004W YPR097WQ06839 1073 aa4.76□□□□□ -1.65
MVP1YMR004W TYW1Q08960 810 aaKnown RBP4.76□□□□□ -1.65
MVP1YMR004W IXR1P33417 597 aa4.75□□□□□ -1.65
MVP1YMR004W SCW11P53189 542 aa4.75□□□□□ -1.65
MVP1YMR004W PUS6P53294 404 aa4.75□□□□□ -1.65
MVP1YMR004W FPK1P53739 893 aa4.75□□□□□ -1.65
MVP1YMR004W HPF1Q05164 967 aa4.75□□□□□ -1.65
MVP1YMR004W YDL206WQ12424 762 aa4.75□□□□□ -1.65
MVP1YMR004W MIP1P15801 1254 aa4.74□□□□□ -1.65
MVP1YMR004W TBF1Q02457 562 aa4.74□□□□□ -1.65
MVP1YMR004W TY1A-BLQ12266 440 aa4.74□□□□□ -1.65
MVP1YMR004W YMR196WQ04336 1088 aa4.73□□□□□ -1.65
MVP1YMR004W TRM1P15565 570 aaKnown RBP4.7□□□□□ -1.66
MVP1YMR004W DIT2P21595 489 aa4.7□□□□□ -1.66
MVP1YMR004W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
MVP1YMR004W LSC2P53312 427 aa4.69□□□□□ -1.66
MVP1YMR004W ARG82P07250 355 aa4.68□□□□□ -1.66
MVP1YMR004W AAD14P42884 376 aa4.68□□□□□ -1.66
MVP1YMR004W UBP2Q01476 1272 aa4.68□□□□□ -1.66
MVP1YMR004W SCJ1P25303 377 aa4.67□□□□□ -1.66
MVP1YMR004W HST2P53686 357 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms