RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W FAP1P53971 965 aa10.48□□□□□ -0.73
MVP1YMR004W MTC1P47018 478 aaKnown RBP10.33□□□□□ -0.76
MVP1YMR004W PRY3P47033 881 aa9.94□□□□□ -0.82
MVP1YMR004W YCK3P39962 524 aa9.39□□□□□ -0.91
MVP1YMR004W AAD16Q02895 342 aa9.24□□□□□ -0.93
MVP1YMR004W HAA1Q12753 694 aaKnown RBP9.22□□□□□ -0.93
MVP1YMR004W PRI1P10363 409 aa9.12□□□□□ -0.95
MVP1YMR004W DRS1P32892 752 aaKnown RBP9.09□□□□□ -0.95
MVP1YMR004W ISW2Q08773 1120 aa8.68□□□□□ -1.02
MVP1YMR004W RPG1P38249 964 aaKnown RBP8.59□□□□□ -1.03
MVP1YMR004W TSR3Q12094 313 aaKnown RBP8.54□□□□□ -1.04
MVP1YMR004W BUD31P25337 157 aaPredicted RBP8.25□□□□□ -1.09
MVP1YMR004W YGL015CP33199 130 aa8.25□□□□□ -1.09
MVP1YMR004W MRPL32P25348 183 aa8.19□□□□□ -1.1
MVP1YMR004W DIP2Q12220 943 aaPredicted RBP8.17□□□□□ -1.1
MVP1YMR004W RSE1Q04693 1361 aaKnown RBP8.05□□□□□ -1.12
MVP1YMR004W REB1P21538 810 aa7.84□□□□□ -1.15
MVP1YMR004W RPL17AP05740 184 aaKnown RBP7.83□□□□□ -1.16
MVP1YMR004W RPL17BP46990 184 aaKnown RBP7.83□□□□□ -1.16
MVP1YMR004W AVT3P36062 692 aa7.73□□□□□ -1.17
MVP1YMR004W SIS1P25294 352 aaKnown RBP7.68□□□□□ -1.18
MVP1YMR004W CDC27P38042 758 aa7.64□□□□□ -1.19
MVP1YMR004W UBP10P53874 792 aaPredicted RBP7.52□□□□□ -1.21
MVP1YMR004W YKR023WP36119 530 aaKnown RBP7.5□□□□□ -1.21
MVP1YMR004W MAP2P38174 421 aaKnown RBP7.48□□□□□ -1.21
MVP1YMR004W SPT21P35209 758 aa7.46□□□□□ -1.22
MVP1YMR004W UBP9P39967 754 aa7.4□□□□□ -1.22
MVP1YMR004W TFC8Q12308 588 aa7.35□□□□□ -1.23
MVP1YMR004W HOP09932 586 aa7.33□□□□□ -1.24
MVP1YMR004W DCD1P06773 312 aa7.31□□□□□ -1.24
MVP1YMR004W BFR2Q06631 534 aaKnown RBP7.31□□□□□ -1.24
MVP1YMR004W SCY1P53009 804 aa7.22□□□□□ -1.25
MVP1YMR004W TIF4632P39936 914 aaKnown RBP7.21□□□□□ -1.26
MVP1YMR004W TGL3P40308 642 aa7.2□□□□□ -1.26
MVP1YMR004W SLX5P32828 619 aaKnown RBP7.17□□□□□ -1.26
MVP1YMR004W RIM101P33400 625 aa7.09□□□□□ -1.27
MVP1YMR004W BCH2P36122 765 aa7.08□□□□□ -1.28
MVP1YMR004W EPS1P40557 701 aa6.87□□□□□ -1.31
MVP1YMR004W YBL029C-AQ3E756 94 aa6.87□□□□□ -1.31
MVP1YMR004W BDF1P35817 686 aa6.86□□□□□ -1.31
MVP1YMR004W MST1P07236 462 aa6.83□□□□□ -1.32
MVP1YMR004W OXP1P28273 1286 aa6.81□□□□□ -1.32
MVP1YMR004W YOR238WQ08634 303 aa6.76□□□□□ -1.33
MVP1YMR004W NSR1P27476 414 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
MVP1YMR004W PTP3P40048 928 aa6.73□□□□□ -1.33
MVP1YMR004W YIL055CP40523 627 aaKnown RBP6.72□□□□□ -1.33
MVP1YMR004W VNX1P42839 908 aa6.71□□□□□ -1.33
MVP1YMR004W AIR2Q12476 344 aaKnown RBP6.7□□□□□ -1.34
MVP1YMR004W YJL171CP46992 396 aa6.67□□□□□ -1.34
MVP1YMR004W BBC1P47068 1157 aa6.66□□□□□ -1.34
MVP1YMR004W YAP5P40574 245 aa6.66□□□□□ -1.34
MVP1YMR004W SPP1Q03012 353 aa6.64□□□□□ -1.35
MVP1YMR004W RSM7P47150 247 aa6.63□□□□□ -1.35
MVP1YMR004W FKH1P40466 484 aa6.62□□□□□ -1.35
MVP1YMR004W AI2P03876 854 aa6.61□□□□□ -1.35
MVP1YMR004W WSC3Q12215 556 aa6.6□□□□□ -1.35
MVP1YMR004W TIF11P38912 153 aaKnown RBP6.55□□□□□ -1.36
MVP1YMR004W YAH1Q12184 172 aaKnown RBP6.53□□□□□ -1.36
MVP1YMR004W GTT3P39996 337 aa6.51□□□□□ -1.37
MVP1YMR004W BMT6Q12291 365 aa6.46□□□□□ -1.37
MVP1YMR004W LDB19Q12502 818 aa6.44□□□□□ -1.38
MVP1YMR004W ULI1P43604 169 aa6.43□□□□□ -1.38
MVP1YMR004W YLR271WQ06152 274 aa6.42□□□□□ -1.38
MVP1YMR004W IOC2Q12072 812 aa6.42□□□□□ -1.38
MVP1YMR004W PSD2P53037 1138 aaKnown RBP6.4□□□□□ -1.39
MVP1YMR004W PIB1Q06651 286 aa6.4□□□□□ -1.39
MVP1YMR004W MSB4Q12317 492 aa6.35□□□□□ -1.39
MVP1YMR004W MRM1P25270 412 aa6.34□□□□□ -1.39
MVP1YMR004W EAP1P36041 632 aaKnown RBP6.33□□□□□ -1.4
MVP1YMR004W RGA2Q06407 1009 aa6.31□□□□□ -1.4
MVP1YMR004W TFA1P36100 482 aa6.3□□□□□ -1.4
MVP1YMR004W YOL036WQ08206 761 aa6.29□□□□□ -1.4
MVP1YMR004W RTG1P32607 177 aa6.28□□□□□ -1.4
MVP1YMR004W SET4P42948 560 aa6.27□□□□□ -1.41
MVP1YMR004W TRP5P00931 707 aaKnown RBP6.26□□□□□ -1.41
MVP1YMR004W NCR1Q12200 1170 aa6.25□□□□□ -1.41
MVP1YMR004W YMR1P47147 688 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
MVP1YMR004W YNL035CP53962 389 aaKnown RBP6.23□□□□□ -1.41
MVP1YMR004W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
MVP1YMR004W SEC61P32915 480 aa6.22□□□□□ -1.41
MVP1YMR004W VPS29P38759 282 aa6.22□□□□□ -1.41
MVP1YMR004W DBP1P24784 617 aaKnown RBP6.21□□□□□ -1.42
MVP1YMR004W SSP1P38871 571 aa6.2□□□□□ -1.42
MVP1YMR004W VMA1P17255 1071 aaKnown RBP6.2□□□□□ -1.42
MVP1YMR004W YFR006WP43590 535 aa6.19□□□□□ -1.42
MVP1YMR004W SAM3Q08986 587 aa6.19□□□□□ -1.42
MVP1YMR004W RTG3P38165 486 aa6.18□□□□□ -1.42
MVP1YMR004W STS1P38637 319 aa6.16□□□□□ -1.42
MVP1YMR004W CST9Q06032 482 aa6.16□□□□□ -1.42
MVP1YMR004W TFG1P41895 735 aaPredicted RBP6.14□□□□□ -1.43
MVP1YMR004W BCK2P33306 851 aa6.12□□□□□ -1.43
MVP1YMR004W MGA2P40578 1113 aa6.12□□□□□ -1.43
MVP1YMR004W DAN4P47179 1161 aa6.11□□□□□ -1.43
MVP1YMR004W JIP4Q03361 876 aa6.1□□□□□ -1.43
MVP1YMR004W ABP1P15891 592 aaKnown RBP6.09□□□□□ -1.43
MVP1YMR004W SAP30P38429 201 aa6.09□□□□□ -1.43
MVP1YMR004W YDL129WQ07555 291 aa6.07□□□□□ -1.44
MVP1YMR004W RCR1P38212 213 aa6.06□□□□□ -1.44
MVP1YMR004W GYP5Q12344 894 aa6.06□□□□□ -1.44
MVP1YMR004W CHL1P22516 861 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms