RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W TY1A-JR2P47099 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-DR1Q03856 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-ML1Q04706 440 aaKnown RBP7.5□□□□□ -1.21
CST9YLR394W TY1A-BRQ12217 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-NL2Q12470 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-GR2Q12485 440 aa7.5□□□□□ -1.21
CST9YLR394W SPT16P32558 1035 aaKnown RBP7.49□□□□□ -1.21
CST9YLR394W LAM6Q08001 693 aa7.49□□□□□ -1.21
CST9YLR394W SEC2P17065 759 aa7.48□□□□□ -1.21
CST9YLR394W GCR2Q01722 534 aa7.48□□□□□ -1.21
CST9YLR394W MAK21Q12176 1025 aaKnown RBP7.48□□□□□ -1.21
CST9YLR394W MVP1P40959 511 aaKnown RBP7.47□□□□□ -1.21
CST9YLR394W CLA4P48562 842 aa7.47□□□□□ -1.21
CST9YLR394W COX6P00427 148 aa7.46□□□□□ -1.21
CST9YLR394W CDC4P07834 779 aa7.42□□□□□ -1.22
CST9YLR394W VPS70P47161 811 aa7.42□□□□□ -1.22
CST9YLR394W FRK1Q03002 865 aaPredicted RBP7.42□□□□□ -1.22
CST9YLR394W YPR109WQ06104 294 aa7.42□□□□□ -1.22
CST9YLR394W RGR1P19263 1082 aa7.41□□□□□ -1.22
CST9YLR394W PAT1P25644 796 aaKnown RBP7.41□□□□□ -1.22
CST9YLR394W RRN7P40992 514 aa7.41□□□□□ -1.22
CST9YLR394W GAR1P28007 205 aaKnown RBP7.4□□□□□ -1.22
CST9YLR394W BDP1P46678 594 aa7.4□□□□□ -1.22
CST9YLR394W GBP2P25555 427 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
CST9YLR394W HED1Q03937 162 aa7.36□□□□□ -1.23
CST9YLR394W KEX2P13134 814 aa7.32□□□□□ -1.24
CST9YLR394W MET22P32179 357 aa7.32□□□□□ -1.24
CST9YLR394W ERF2Q06551 359 aa7.31□□□□□ -1.24
CST9YLR394W ENV9Q08651 330 aa7.3□□□□□ -1.24
CST9YLR394W MOD5P07884 428 aa7.27□□□□□ -1.25
CST9YLR394W PSE1P32337 1089 aaKnown RBP7.27□□□□□ -1.25
CST9YLR394W PAC1P39946 494 aaKnown RBP7.26□□□□□ -1.25
CST9YLR394W SAS10Q12136 610 aaPredicted RBP7.26□□□□□ -1.25
CST9YLR394W ASH1P34233 588 aa7.24□□□□□ -1.25
CST9YLR394W YDR444WQ04093 687 aa7.24□□□□□ -1.25
CST9YLR394W MET32Q12041 191 aa7.24□□□□□ -1.25
CST9YLR394W CLB5P30283 435 aa7.23□□□□□ -1.25
CST9YLR394W CKB1P43639 278 aa7.23□□□□□ -1.25
CST9YLR394W AGE1Q04412 482 aa7.23□□□□□ -1.25
CST9YLR394W PBS2P08018 668 aa7.22□□□□□ -1.25
CST9YLR394W AFT1P22149 690 aa7.22□□□□□ -1.25
CST9YLR394W TUB4P53378 473 aa7.21□□□□□ -1.25
CST9YLR394W RTF1P53064 558 aa7.2□□□□□ -1.26
CST9YLR394W HST3P53687 447 aa7.2□□□□□ -1.26
CST9YLR394W LCB5Q06147 687 aaKnown RBP7.18□□□□□ -1.26
CST9YLR394W PUS5Q06244 254 aa7.18□□□□□ -1.26
CST9YLR394W YNL115CP53925 644 aa7.17□□□□□ -1.26
CST9YLR394W YDL176WQ12027 708 aa7.15□□□□□ -1.27
CST9YLR394W MAM3Q12296 706 aa7.14□□□□□ -1.27
CST9YLR394W SIT4P20604 311 aa7.13□□□□□ -1.27
CST9YLR394W RRD1P40454 393 aaKnown RBP7.13□□□□□ -1.27
CST9YLR394W DSF2P38213 736 aa7.12□□□□□ -1.27
CST9YLR394W TPD3P31383 635 aa7.11□□□□□ -1.27
CST9YLR394W YJR115WP47152 169 aa7.11□□□□□ -1.27
CST9YLR394W KXD1P53158 218 aa7.1□□□□□ -1.27
CST9YLR394W TEA1P47988 759 aa7.09□□□□□ -1.28
CST9YLR394W IES2P40154 320 aa7.08□□□□□ -1.28
CST9YLR394W MSB3P48566 633 aaPredicted RBP7.08□□□□□ -1.28
CST9YLR394W HXT10P43581 546 aa7.07□□□□□ -1.28
CST9YLR394W SYH1Q02875 849 aaKnown RBP7.06□□□□□ -1.28
CST9YLR394W NUP42P49686 430 aaKnown RBP7.05□□□□□ -1.28
CST9YLR394W NIS1P53939 407 aa7.05□□□□□ -1.28
CST9YLR394W PDC1P06169 563 aaKnown RBP7.03□□□□□ -1.28
CST9YLR394W SPB4P25808 606 aaPredicted RBP7□□□□□ -1.29
CST9YLR394W SLY41P22215 453 aa6.99□□□□□ -1.29
CST9YLR394W UGA3P26370 528 aa6.99□□□□□ -1.29
CST9YLR394W ACO2P39533 789 aa6.99□□□□□ -1.29
CST9YLR394W DIT2P21595 489 aa6.98□□□□□ -1.29
CST9YLR394W FPK1P53739 893 aa6.98□□□□□ -1.29
CST9YLR394W PTK2P47116 818 aaKnown RBP6.97□□□□□ -1.29
CST9YLR394W RPA14P50106 137 aa6.97□□□□□ -1.29
CST9YLR394W CAF120P53836 1060 aa6.97□□□□□ -1.29
CST9YLR394W YLR346CQ06139 101 aa6.96□□□□□ -1.3
CST9YLR394W OPT2Q06593 877 aa6.96□□□□□ -1.3
CST9YLR394W YPR097WQ06839 1073 aa6.96□□□□□ -1.3
CST9YLR394W ALR1Q08269 859 aa6.96□□□□□ -1.3
CST9YLR394W LEU3P08638 886 aa6.95□□□□□ -1.3
CST9YLR394W PUS6P53294 404 aa6.95□□□□□ -1.3
CST9YLR394W YMR196WQ04336 1088 aa6.95□□□□□ -1.3
CST9YLR394W SRF1Q12516 437 aa6.95□□□□□ -1.3
CST9YLR394W KIP2P28743 706 aa6.94□□□□□ -1.3
CST9YLR394W MRT4P33201 236 aaKnown RBP6.93□□□□□ -1.3
CST9YLR394W TBF1Q02457 562 aa6.93□□□□□ -1.3
CST9YLR394W YDL206WQ12424 762 aa6.93□□□□□ -1.3
CST9YLR394W IXR1P33417 597 aa6.93□□□□□ -1.3
CST9YLR394W RTT106P40161 455 aa6.92□□□□□ -1.3
CST9YLR394W GLY1P37303 387 aaKnown RBP6.91□□□□□ -1.3
CST9YLR394W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
CST9YLR394W NUP85P46673 744 aa6.91□□□□□ -1.3
CST9YLR394W TRM1P15565 570 aaKnown RBP6.88□□□□□ -1.31
CST9YLR394W HST2P53686 357 aa6.88□□□□□ -1.31
CST9YLR394W TYW1Q08960 810 aaKnown RBP6.88□□□□□ -1.31
CST9YLR394W SCJ1P25303 377 aa6.87□□□□□ -1.31
CST9YLR394W TRK2P28584 889 aa6.87□□□□□ -1.31
CST9YLR394W MTC5Q03897 1148 aa6.87□□□□□ -1.31
CST9YLR394W SCW11P53189 542 aa6.86□□□□□ -1.31
CST9YLR394W YGR035CP53222 116 aa6.86□□□□□ -1.31
CST9YLR394W MIP1P15801 1254 aa6.85□□□□□ -1.31
CST9YLR394W LEO1P38439 464 aa6.85□□□□□ -1.31
CST9YLR394W YIR007WP40566 764 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms